Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0150 ATGGCACAATTACCTCCTAAAATACCAACCATACCCCAAAATTGGTCTAATTTTTATCACAAAAGAGCATCTTCAATGTGCAACTTAATTCCATCACCAACCACAACTGCAACCACAACCACGACCACTACTCTTCCGAACACTTCTCCTCCTCAACAACAACAACATAATTTGCCATCATGGGTTGATGAGTTCCTCGACTTCTCGTCGTCACGACGAGGAGCTCATCGGCGTTCAGCTAGCGACTCAATTGCATTTCTTGAGACGTCGTTCGACAGGTTGGACGAGGACCAGCTGATTTCGATGTTTTCCGATGATTTTGCTGCCGTTGCTGTTCAACAGCCGCAGACTTCTTCCACGTCCAACCCATCGTCACCGTGCTCCGATGAGAATAGTAATAATGATGAGAAGCCAATGGGAATGGCGTTGGACGTTGTGAATCATGAGGTGAAGCCTAAGAATGAAACGGTTGAGGAGGAAAGCTCATGTAAGAATGATGGGGCGGCGCAGCCACCCTCTGCCACCACTACCGGCTGCACTGAAACCGTGTGTGATCCCAAAAGGGTCAAAAGAATTTTGGCTAACCGGCAATCAGCTCAAAGGTCAAGGGTGAGAAAGCTACAATACATTTCAGAGCTTGAAAGGAGTGTAACAAGTTTGCAGACGGAGGTATCAGCATTGTCACCACGAGTTGCATTTTTGGACCACCAACGTTTGATTCTTAATGTCGACAACAGTGCCTTGAAGCAACGAATTGCAGCTTTGGCCCAAGATAAGATTTTCAAAGATGCTCATCAAGAAGCATTAAAGAAAGAAATAGAAAGATTGAGGCAAATATATCATCACCAACAGAACCTACAAAAGATGGGTAACTCAATCAACACTCCTCAATCCCCACAAGCATCACAACTACAACCACACATGCAACCTCATCATTCTCTCCATCATCATCAACAACCATTGGCATGCATGGACAAAGAGCAACTCCTAAGTTGA 996 0.4508 MAQLPPKIPTIPQNWSNFYHKRASSMCNLIPSPTTTATTTTTTTLPNTSPPQQQQHNLPSWVDEFLDFSSSRRGAHRRSASDSIAFLETSFDRLDEDQLISMFSDDFAAVAVQQPQTSSTSNPSSPCSDENSNNDEKPMGMALDVVNHEVKPKNETVEEESSCKNDGAAQPPSATTTGCTETVCDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHHQQNLQKMGNSINTPQSPQASQLQPHMQPHHSLHHHQQPLACMDKEQLLS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0150 331 Coils Coil 266 286 - -
Lan19g0150 331 MobiDBLite consensus disorder prediction 152 180 - -
Lan19g0150 331 Pfam bZIP transcription factor 187 232 IPR004827 GO:0003700|GO:0006355
Lan19g0150 331 MobiDBLite consensus disorder prediction 289 309 - -
Lan19g0150 331 SUPERFAMILY Leucine zipper domain 187 241 IPR046347 GO:0003700|GO:0006355
Lan19g0150 331 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Lan19g0150 331 PANTHER BASIC LEUCINE ZIPPER 2 1 308 - -
Lan19g0150 331 MobiDBLite consensus disorder prediction 30 56 - -
Lan19g0150 331 MobiDBLite consensus disorder prediction 112 139 - -
Lan19g0150 331 PANTHER BASIC LEUCINE ZIPPER 34 1 308 - -
Lan19g0150 331 MobiDBLite consensus disorder prediction 289 321 - -
Lan19g0150 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 237 IPR004827 GO:0003700|GO:0006355
Lan19g0150 331 MobiDBLite consensus disorder prediction 166 180 - -
Lan19g0150 331 Gene3D - 186 285 - -
Lan19g0150 331 MobiDBLite consensus disorder prediction 112 135 - -
Lan19g0150 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700|GO:0006355
Lan19g0150 331 CDD bZIP_plant_RF2 188 238 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0150 Lan-Chr19 1323237 1325908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0150 1 265 bZIP Transcription Factor Family AT3G58120 52.174 4.71e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan19g0150 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0150 - - gmx:100820197 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0150 19 1323237 1325908 Lan5g0900 5 22032221 22035551 LSH