Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0146 ATGGCAAAACTGAGATCAGGAGAAATAGACATAGATTCATACACAATCAAAGACACTGGAGATATTATCAGAGTTGGGGATTGTGTGTTGATTCTTCCTTTAGATACGAGAAAGCCACAATATGTGGCGTGTGTGGAGAAGTTTGAGAAGGATAGTAAGAATAATATAAATGTGCATGTGAGGTGGTATTATAGGCCAGAAGAAGCTTTTGGAGGAAGAAAGAAATTCCATGGAGCAAATGAGCTTTTTTTATCTGACCATTATGATGTTCACAGTGCTGACGCCATTGAAGGGAAATGTGTTGTGCACCCCTTTGATAATTATGTTAAACTTGAGAATGCAGGTGCAAAGGATTTCTATTGTAGATTTGAGTACAAGGTTGCTACTGGGGCTTTTACACCGGACAGTGTTGCAGTGTATTGCAAATGTGACATGCCTTATAACCCAGATATCTTCATGGTGCAGTGTGTGAAGTGCCAGGATCGGTTCCATCATGCTTGTGTGGGCATGACCACTGAAGAAGCAATGGCATCGATCCAGTTTCTATGTTCTGATTGTTTATCTAATTGCAAGGAAAAACTTGATGCTAGAACATTCCATGACAAAGGAGTGTCACCTGCCATTGAAGCAGTTTCTAACATGTTGGCTGTGAACAATGTAGAATATGCGAACATTGAAGGGGTCCAAGTAGGTATTGGAGAAAATGAGAATATTTGGCATAATTTCAGAAATGAAGAGCATAATGGTAATACACAAGAACATAGCCAAGTTCCAACAGTGATAAACCCTAATCTAGAAAAGATGGTAGGAAGGTATGGTTTTGGAAACCAAGCACAAGAGTTCAGTTGTAGCAGTCAGAGTAGTGTCAATAATAATGTAATACCAGTGAGTAGTTCTCAAAGGGTGATGGATGTTCTTAACAATATGGATGGCATAGAAAGTGGTAGTACTTTGTGGTGTGAAACCATTTATTTGCTTGAGGATCCAGTAAGGAGGGGAATGTTCCTTGCAATGAAGAATGATGCTTGTAGATTAGCTTGGATCAAGTTTAGGTGTAATATTAAGGACAACTGA 1074 0.392 MAKLRSGEIDIDSYTIKDTGDIIRVGDCVLILPLDTRKPQYVACVEKFEKDSKNNINVHVRWYYRPEEAFGGRKKFHGANELFLSDHYDVHSADAIEGKCVVHPFDNYVKLENAGAKDFYCRFEYKVATGAFTPDSVAVYCKCDMPYNPDIFMVQCVKCQDRFHHACVGMTTEEAMASIQFLCSDCLSNCKEKLDARTFHDKGVSPAIEAVSNMLAVNNVEYANIEGVQVGIGENENIWHNFRNEEHNGNTQEHSQVPTVINPNLEKMVGRYGFGNQAQEFSCSSQSSVNNNVIPVSSSQRVMDVLNNMDGIESGSTLWCETIYLLEDPVRRGMFLAMKNDACRLAWIKFRCNIKDN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0146 357 PANTHER CHROMATIN REMODELING PROTEIN EBS 2 201 - -
Lan19g0146 357 SUPERFAMILY FYVE/PHD zinc finger 132 191 IPR011011 -
Lan19g0146 357 ProSitePatterns Zinc finger PHD-type signature. 141 186 IPR019786 -
Lan19g0146 357 Gene3D - 4 133 IPR043151 -
Lan19g0146 357 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Lan19g0146 357 SMART BAH_4 21 136 IPR001025 GO:0003682
Lan19g0146 357 Pfam BAH domain 23 135 IPR001025 GO:0003682
Lan19g0146 357 SMART PHD_3 140 187 IPR001965 -
Lan19g0146 357 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 203 IPR013083 -
Lan19g0146 357 PANTHER OS08G0421900 PROTEIN 2 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0146 Lan-Chr19 1287040 1290266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0146 41 132 Core DNA Replication Machinery Family AT4G14700 29.032 6.63e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0146 K25868 - lang:109333890 734.947