Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0123 ATGTTATGTATACAGGATCGCTCTCTTGATTTCCATGCTCTATGTGCTTTATATGCTATCACAGACATTGCACTTGTCACATCCTTGAGGGACGGCATGAATCTTGTCAGTTATGAATTTGTGGCATGTCAAGATAAGAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCTCAGTCTCTTGGTGCTGGTGCAATTCTGGTCAACCCCTGGAACATCACTGAAGTTGCTGCTGCAATCGCCAAAGCCCTGAATATGCCATCTGCCGAAAGGGAGAAGCGACATAGGCATAACTTTCATCATGTAAAAACCCACACTGCTCAAGAATGGGCAGAAATTTTTGTAAGTGAGCTAAATGATACTGTTGTTGAGGCACAGTTAAGGACAAAACAAGTTCCACCCCGCCTGCCAACCAAGACTGCAATTGAACGTTATCTGCAATCAACTAATCGGTTGCTTATTTTGGGATTCAATGGAACTTTAACTGAACCTGTTGAAAGAAAAGGTGACCAGTATAAAGAAATGGAACCCACTGTGCATCCAGAACTCAAACAGCCGTTGATTGAACTTTGCCATGACCCAAAGACCACTGTTGTTGTGCTTAGTGGAAGTGGCAGAACGGTTCTAGATGAAAACTTCAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAAAGGAGAATGGATGACAACAATGCCAGAGCAGCTAAATATGGAGTGGGTTGACAGTGTGAAGCATGTTTTTGAGTATTTCACAGAAAGAACACCTAGGTCGCATTTTGAAGAAAGGGATGCTTCACTTGTGTGGAATTACAAACATGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACGGGTCCAATTTCTAATGCACCTGTTGAAGTTGTTCAAGGGAGCAGATCTGTTGAGGTGCGGGCTGCTGGTGTTACCAAGGGAGCAGGCATTGACCGTATCCTGGGTGAGATAATCCACAATAAATCCATGACAACACCAATCGATTATGTTCTGTGCGTAGGACATTTTCTGACAAAGCAGGATGAAGATATATATGCCTTTTTTGAACCAGAGCTTCCTTCTGCTGGTGTGAGTCTTCCTCGTAATAAGGTAACAGAAGGAGCTAAGTTCACTGCTGAGAGGATATCATCTGTGAAGACACCAACACATAAAAATGGTCTAAAGTCGTTGCAAAATAAGGCGCAACGTCCTCAGGCAAATGCAGAGAAGAAACAAACCAATCATATCGCTCGACCACCGAGGCGACCAACTCATGAAAAGACATCTTGGAATGTCCTTGACCTCAAGAAAGAGAATTACTTCTCCTGTGCCGTTGGAAGAACTCAGACAAATGCTCGCTACACACTCGGATCATCAGATGATGTTGTTTCATTTCTCAAGGAACTAGCAGCTGCATCTTCTTCTAACTCTTCATTCTCAGTATGA 1488 0.4335 MLCIQDRSLDFHALCALYAITDIALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMPSAEREKRHRHNFHHVKTHTAQEWAEIFVSELNDTVVEAQLRTKQVPPRLPTKTAIERYLQSTNRLLILGFNGTLTEPVERKGDQYKEMEPTVHPELKQPLIELCHDPKTTVVVLSGSGRTVLDENFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFEYFTERTPRSHFEERDASLVWNYKHADVEFGRLQARDMLQHLWTGPISNAPVEVVQGSRSVEVRAAGVTKGAGIDRILGEIIHNKSMTTPIDYVLCVGHFLTKQDEDIYAFFEPELPSAGVSLPRNKVTEGAKFTAERISSVKTPTHKNGLKSLQNKAQRPQANAEKKQTNHIARPPRRPTHEKTSWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVSFLKELAAASSSNSSFSV* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0123 495 SUPERFAMILY HAD-like 153 484 IPR036412 -
Lan19g0123 495 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 6 484 IPR001830 GO:0003824|GO:0005992
Lan19g0123 495 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 6 484 - -
Lan19g0123 495 Pfam Glycosyltransferase family 20 6 121 IPR001830 GO:0003824|GO:0005992
Lan19g0123 495 Gene3D - 243 323 - -
Lan19g0123 495 Gene3D Glycogen Phosphorylase B; 107 118 - -
Lan19g0123 495 MobiDBLite consensus disorder prediction 403 426 - -
Lan19g0123 495 TIGRFAM T6PP: trehalose-phosphatase 152 399 IPR003337 GO:0003824|GO:0005992
Lan19g0123 495 Gene3D Glycogen Phosphorylase B; 5 106 - -
Lan19g0123 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 124 - -
Lan19g0123 495 Pfam Trehalose-phosphatase 159 395 IPR003337 GO:0003824|GO:0005992
Lan19g0123 495 CDD HAD_TPP 154 372 - -
Lan19g0123 495 Gene3D - 156 367 IPR023214 -
Lan19g0123 495 MobiDBLite consensus disorder prediction 403 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0123 Lan-Chr19 1109550 1113938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0123 6 489 Trehalose Biosynthesis Gene Families AT1G78580 71.400 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0123 K16055 - gmx:100789554 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0123 19 1109550 1113938 Lan9g0230 9 2992821 3023659 LSH