Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0122 ATGGTTGGATTCCAGGGTGAGCATATGAATGGGAACATGTATAACGGCAACAATTCTAGTAGTTTTCCAGGTCGTGTGGAACGACTTGTGAGAGGAAGAAAGCTAAGAAAAAACAGCAAGGCATCTCTTTCCAATGAATCTCCAGATAATAACAATAATGACAGTAATAATAATATTATCAATGGGGTTACTGAATCTTTGGATCATGACCTACGCTTAAGAGAAGCTAATAGCACAACTCATACTTCCCATTTTGAACGGTTCCTGGAAGGTGCAGCAGCAGCAAGGGCTTTTACTGACGGATATGAAAGGGAAGATGGGAAGCCTTTTAGACAACGGCTTTTGGTGGTAGCTAATAGGCTGCCGGTCTCAGCTGTTAGGAAAGGTGAGGATTCATGGTCTTTGGAGATAAGCGCTGGTGGCCTCGTGAGTGCTCTTTTAGGTGTGAAGGAATTTGAGGCGAAGTGGATAGGTTGGGCAGGTGTGAATGTGCCAGATGAGATTGGACAAGAGGCACTTACGAAAGCATTGGCTGAAAAGAGATGTATCCCAGTATTTCTTGATGAAGAGATAGTTCATCAATATTATAATGGCTATTGCAATAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTACCCCAAGAAGATCGCCTTGCTACCACGCGCAGTTTCCAGTCTCAGTTTGCAGCATATCAGAAAGCAAACCAAATGTTTGCTGATGTTGTAAATGAGCACTATGAAGAGGGTGATGTTGTCTGGTGCCACGATTACCATCTTATGTTTCTGCCACAATGCTTAAAAAATCACAACAGCAAAATGAAAGTTGGCTGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCACAGAACACTGCCATCTCGTTCCGAGCTCCTGCATGCTGTTCTCGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCACGGCATTTTGTTAGTGCATGTACTCGGATCCTTGGACTTGAGGGCACACCTGAAGGGGTTGAGGATCAAGGGAAGCTAACTCGCGTTGCTGCATTTCCAATTGGTATAGACTCCGAAAGATTCATACGTGCACTTTACCTTCCTCAAGTCCAGGAGCACATCAAAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCACAAAAAATTCTAGCGTTTGAAAAGTTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTTGTTCTGCTTCAGATTGCTGTGCCAACAAGAACAGACGTTCCTGAGTATCAAAAGCTCACAAGTCAGGTACATGAAATTGTTGGTCGCATCAATGGCAGATTTGGATCACTTACTGCTGTTCCTATACATCACCTAGATCGCTCTCTTGATTTCCATGCTCTATGTGCTTTATATGCTATCACAGACATTGCACTTGTCACATCCTTGAGGGACGGCATGAATCTTGTCAGTTATGAATTTGTGGCATGTCAAGATAAGAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCTCAGTCTCTTGGTGCTGGTGCAATTCTGGTCAACCCCTGGAACATCACTGAAGTTGCTGCTGCAATCGCCAAAGCCCTGAATATGCCATCTGCCGAAAGGGAGAAGCGACATAGGCATAACTTTCATCATGTAAAAACCCACACTGCTCAAGAATGGGCAGAAATTTTTGTAAGTGAGCTAAATGATACTGTTGTTGAGGCACAGTTAAGGACAAAACAAGTTCCACCCCGCCTGCCAACCAAGACTGCAATTGAACGTTATCTGCAATCAACTAATCGGTTGCTTATTTTGGGATTCAATGGAACTTTAACTGAACCTGTTGAAAGAAAAGGTGACCAGTATAAAGAAATGGAACCCACTGTGCATCCAGAACTCAAACAGCCGTTGATTGAACTTTGCCATGACCCAAAGACCACTGTTGTTGTGCTTAGTGGAAGTGGCAGAACGGTTCTAGATGAAAACTTCAAAGAATATGACATGTGGCTGGCAGCAGAGAATGGGATGTTTTTAAACCCTTCAAAAGGAGAATGGATGACAACAATGCCAGAGCAGCTAAATATGGAGTGGGTTGACAGTGTGAAGCATGTTTTTGAGTATTTCACAGAAAGAACACCTAGGTCGCATTTTGAAGAAAGGGATGCTTCACTTGTGTGGAATTACAAACATGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACGGGTCCAATTTCTAATGCACCTGTTGAAGTTGTTCAAGGGAGCAGATCTGTTGAGGTGCGGGCTGCTGGTGTTACCAAGGGAGCAGGCATTGACCGTATCCTGGGTGAGATAATCCACAATAAATCCATGACAACACCAATCGATTATGTTCTGTGCGTAGGACATTTTCTGACAAAGCAGGATGAAGATATATATGCCTTTTTTGAACCAGAGCTTCCTTCTGCTGGTGTGAGTCTTCCTCGTAATAAGGTAACAGAAGGAGCTAAGTTCACTGCTGAGAGGATATCATCTGTGAAGACACCAACACATAAAAATGGTCTAAAGTCGTTGCAAAATAAGGCGCAACGTCCTCAGGCAAATGCAGAGAAGAAACAAACCAATCATATCGCTCGACCACCGAGGCGACCAACTCATGAAAAGACATCTTGGAATGTCCTTGACCTCAAGAAAGAGAATTACTTCTCCTGTGCCGTTGGAAGAACTCAGACAAATGCTCGCTACACACTCGGATCATCAGATGATGTTGTTTCATTTCTCAAGGAACTAGCAGCTGCATCTTCTTCTAACTCTTCATTCTCAGTATGA 2859 0.4309 MVGFQGEHMNGNMYNGNNSSSFPGRVERLVRGRKLRKNSKASLSNESPDNNNNDSNNNIINGVTESLDHDLRLREANSTTHTSHFERFLEGAAAARAFTDGYEREDGKPFRQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKEFEAKWIGWAGVNVPDEIGQEALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYQKANQMFADVVNEHYEEGDVVWCHDYHLMFLPQCLKNHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSERFIRALYLPQVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFHALCALYAITDIALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMPSAEREKRHRHNFHHVKTHTAQEWAEIFVSELNDTVVEAQLRTKQVPPRLPTKTAIERYLQSTNRLLILGFNGTLTEPVERKGDQYKEMEPTVHPELKQPLIELCHDPKTTVVVLSGSGRTVLDENFKEYDMWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFEYFTERTPRSHFEERDASLVWNYKHADVEFGRLQARDMLQHLWTGPISNAPVEVVQGSRSVEVRAAGVTKGAGIDRILGEIIHNKSMTTPIDYVLCVGHFLTKQDEDIYAFFEPELPSAGVSLPRNKVTEGAKFTAERISSVKTPTHKNGLKSLQNKAQRPQANAEKKQTNHIARPPRRPTHEKTSWNVLDLKKENYFSCAVGRTQTNARYTLGSSDDVVSFLKELAAASSSNSSFSV* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0122 952 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 112 581 - -
Lan19g0122 952 TIGRFAM T6PP: trehalose-phosphatase 609 856 IPR003337 GO:0003824|GO:0005992
Lan19g0122 952 Gene3D - 700 780 - -
Lan19g0122 952 Pfam Glycosyltransferase family 20 113 578 IPR001830 GO:0003824|GO:0005992
Lan19g0122 952 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 941 - -
Lan19g0122 952 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 46 941 IPR001830 GO:0003824|GO:0005992
Lan19g0122 952 MobiDBLite consensus disorder prediction 41 61 - -
Lan19g0122 952 CDD HAD_TPP 611 829 - -
Lan19g0122 952 CDD GT20_TPS 113 578 IPR001830 GO:0003824|GO:0005992
Lan19g0122 952 SUPERFAMILY HAD-like 610 941 IPR036412 -
Lan19g0122 952 MobiDBLite consensus disorder prediction 860 897 - -
Lan19g0122 952 Gene3D Glycogen Phosphorylase B; 105 359 - -
Lan19g0122 952 Gene3D Glycogen Phosphorylase B; 360 563 - -
Lan19g0122 952 MobiDBLite consensus disorder prediction 860 883 - -
Lan19g0122 952 MobiDBLite consensus disorder prediction 10 24 - -
Lan19g0122 952 Pfam Trehalose-phosphatase 616 852 IPR003337 GO:0003824|GO:0005992
Lan19g0122 952 Gene3D - 613 824 IPR023214 -
Lan19g0122 952 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 113 578 IPR012766 GO:0003825|GO:0005992
Lan19g0122 952 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0122 Lan-Chr19 1095845 1108539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0122 9 946 Trehalose Biosynthesis Gene Families AT1G78580 75.916 0.0 1464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0122 K16055 - gmx:100789554 1589.32