Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0117 ATGACTTCAGGATCGAGACTACCAACATGGAAGGAGAGAGAGAACAACAAAAGAAGAGAGAGAAGAAGAAGAGCCATAGCAGCAAAAATCTTCTCTGGTCTAAGAATGTATGGGAACTTCAAGCTTCCTAAGCACTGTGACAACAATGAAGTTCTCAAAGCTCTTTGCAGTGAAGCTGGTTGGACCGTTCAACCTGATGGCACCACCTATAGGAAGGGATGCAAGGCTATAGAGTGCATGGATATAGTTGGTGGATTATCATCAGCAGCAGCAGCAGCAAGTCCTTGCTCATCTTACCATCCAAGTCCTTGTGCTTCCTACAATCCTAGCCCTGACTCTTCATCCTTCCCAAGCCCATCCTCATCTCCCTATGTCGCAAATCCGAAAAATGATGGTAACTCCCTCATTCCATGGCTCAAAAACCTATCAACTGCATCATCATCCCCTAAACTTTCTCATCTCTACCTTGGCTCCATCAGTGCTCCTGTTACACCTCCACTTAGCTCTCCAACTGCTCGAACACCGCGGATCAGCGCCGATTGGGATGATCAGGCTGCTAGGCCGGGGTGGACAGGGCGGCAGTACTCATTCATGCCATCTTCCACTCCTCAAAGCCCTGCCCGCCAGGCTGTTGACCCTGAATGGTTTGCTGGGATTAAACTTCCTCATGTTAGTCCAACTTCCCCGACTTTCGCCCTCGTGTCTTCGAACCCATTTGCATTCAATGATGGTGGCGGTTCTCGCATGTGGACTCCTGGCCAGAGTGGGACATGCTCTCCTGCTATTGCAGTTGGCTCTGATCACACTGCTGACATTCCAATGTGTGAAGCTTTTTCAGATGAGTTTGCATTTGGAAGCAACACATCGGGTATTGTCAAGCCTTGGGAAGGAGAAAGGATCCATGAAGAATTTGTGGCAGATGATCTTGAACTCACACTTGGTAGCTCAAAAGCCAGGTAA 960 0.4854 MTSGSRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFKLPKHCDNNEVLKALCSEAGWTVQPDGTTYRKGCKAIECMDIVGGLSSAAAAASPCSSYHPSPCASYNPSPDSSSFPSPSSSPYVANPKNDGNSLIPWLKNLSTASSSPKLSHLYLGSISAPVTPPLSSPTARTPRISADWDDQAARPGWTGRQYSFMPSSTPQSPARQAVDPEWFAGIKLPHVSPTSPTFALVSSNPFAFNDGGGSRMWTPGQSGTCSPAIAVGSDHTADIPMCEAFSDEFAFGSNTSGIVKPWEGERIHEEFVADDLELTLGSSKAR* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0117 319 MobiDBLite consensus disorder prediction 108 127 - -
Lan19g0117 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 319 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lan19g0117 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 319 - -
Lan19g0117 319 MobiDBLite consensus disorder prediction 1 21 - -
Lan19g0117 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 143 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0117 Lan-Chr19 1062928 1066438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0117 1 319 BZR Transcription Factor Family AT1G78700 65.680 1.70e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lan19g0117 BES1_N 1.1e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0117 - - mtr:MTR_2g075400 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0117 19 1062928 1066438 Lan5g0866 5 21580590 21584668 LSH
Lan19g0117 19 1062928 1066438 Lan9g0240 9 3169643 3177531 LSH