Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0116 ATGGCCCATGAATCTCTAAATGGGAAAAAGCTAATACAAGAAGAGCTAATAAGAGGGCATGATATGGCAAATCAGTTACTTGAAGTACTTGTTCATAAATCTAGAGTTGAAGAAACATTAATGTTACCACTTGCTCAAGATCTTGTGCATAAGGTATTGATATCATTCACCAATACTTTATTGCTCTTGAACAACAATGGTGATATTTTTGATGAGGAAGTTGTGGCTATCAATGATTTACCTTCGTCTATGAATTGCACAAAGTCTTTGGATTTGGACGAGGCTTACAAGAGTACTTCCAACACTAAACATAGAAGAAGAGGGTGCAACAAGAGAAAATTAAATACATCAACTTGGGAGAGAGACAGTTCAATTCTGAGTGAAGATGGTCATGCATGGAGAAAGTATGGACAAAAAATGACAGCAACATCAAAATATCTCAAGTGCACTCACAAATTTGATCAAGGTTGCTCAGCAATTAAACAAGTACAAAGAATTCAAAAGGACCCTCCATTATACAGAACAACTTATTATGGTCATCACACTTGCAAAAGCACTTTTAATCCAGACATGATTTTTGAGCCTGATTCTTCTTCTGCCTCTTCTATATTACTTAGCTTCAATAATAGCTTCTCAATCAAACAAGAACACCAACTTTCATCACTGTTTTTGCCATCAGAAAAACAAGAGCCTTTGGAAGTGATTCATGATAATCATATTGCTCAGAACCAAATGTCATCATCAGATTATCTCCAATTATGTGAATATGAACTAGATTTCGATTATTGGAGGCATATTAATATGCTATCATCCACAGAATCTGTTCAATTTGATAATGGTTATGGGTGCAGTTTAGATTTTATTAGTTAA 870 0.346 MAHESLNGKKLIQEELIRGHDMANQLLEVLVHKSRVEETLMLPLAQDLVHKVLISFTNTLLLLNNNGDIFDEEVVAINDLPSSMNCTKSLDLDEAYKSTSNTKHRRRGCNKRKLNTSTWERDSSILSEDGHAWRKYGQKMTATSKYLKCTHKFDQGCSAIKQVQRIQKDPPLYRTTYYGHHTCKSTFNPDMIFEPDSSSASSILLSFNNSFSIKQEHQLSSLFLPSEKQEPLEVIHDNHIAQNQMSSSDYLQLCEYELDFDYWRHINMLSSTESVQFDNGYGCSLDFIS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0116 289 Pfam WRKY DNA -binding domain 128 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan19g0116 289 Gene3D WRKY domain 114 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan19g0116 289 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 280 - -
Lan19g0116 289 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 280 IPR044810 GO:0003700
Lan19g0116 289 ProSiteProfiles WRKY domain profile. 122 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan19g0116 289 SUPERFAMILY WRKY DNA-binding domain 124 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan19g0116 289 SMART WRKY_cls 127 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0116 Lan-Chr19 1050114 1053159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0116 8 185 WRKY Transcription Factor Family AT3G56400 34.921 1.81e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan19g0116 WRKY 3.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0116 - - gmx:102663141 286.574