Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0104 ATGGGAGAGAGGAAAGTTTTGAACAAGTATTACCCACCTGACTTTGATCCTGCCAAGCTTCCTCGTGCGAGGAGGCCCAAGAACCAACAGATCAAGGTTCGAATGATGCTTCCCATGAGCATTCGATGCAACACTTGCGGCAATTACATATACAAAGGCACCAAGTTTAATTCGCGAAAGGAAGACGTCATTGGTGAAACATATTTGGGAATTCAAATATTCAGGTTCTACTTTAAATGCACCAAGTGCTCAGCTGAGCTTACCATGAAGACCGATCCTCAGAATTCGGATTATATAGTTGAATCTGGAGCAAGCAGAAATTATGAACCTTGGCGTGCAGAGGATGAGGAAACTGATAAAATGAAGCAGAAGAGGGAAACTGAAGAGTTGGGAGATGCAATGAAATCTTTGGAGAATAGAACCCTGGATTCTAAAAGAGAGATGGACATCCTTGCTGCATTGGATGAGATGAAGTCAATGAAGTCTAGGCATGCAACTGTCACGGTTGATGAAATGCTGGAGGCGTTGCAACGCACAGCAGCTGACAAGGAGAAAAGGCTGGAAGAAGAGGATGAAAAGCTAATAAAGTCAGTTGTATTTCATAATTCAAATGCTTTTGTCAGAAGAGTCCGTGATGAAGATATTGAAAATGAAGAGGAAACAGTTCAACTTTCAAATGCACATGGTGAAACTTCTAGTAACAATCCAAAGAGGCAAAAAACCTCTGAAGATCTTCCCGGCAATGCAACCGACGCTCCGAGAAAAGCCCCTTTGGATGATTCCGGTAAACAAGAAAACTCACATGGTGGTGGTGGTGGAAAGCTTAATCCTTTAGTTAGGATATCCGTTATTAAGAAACCAGTGATCTCTGATGTTAGAAGTTCTGCAGAACCAGAACAGAAGAAAAATGAGGAAGATGGTAAAACAAATACTACTAGCGGATTACTATCTTTGTGTCAAAATTATGGAAGTGATGATGATTAG 984 0.4136 MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGASRNYEPWRAEDEETDKMKQKRETEELGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVTVDEMLEALQRTAADKEKRLEEEDEKLIKSVVFHNSNAFVRRVRDEDIENEEETVQLSNAHGETSSNNPKRQKTSEDLPGNATDAPRKAPLDDSGKQENSHGGGGGKLNPLVRISVIKKPVISDVRSSAEPEQKKNEEDGKTNTTSGLLSLCQNYGSDDD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0104 327 MobiDBLite consensus disorder prediction 222 246 - -
Lan19g0104 327 Pfam Saf4/Yju2 protein 9 327 IPR007590 GO:0000398
Lan19g0104 327 Coils Coil 120 140 - -
Lan19g0104 327 MobiDBLite consensus disorder prediction 109 133 - -
Lan19g0104 327 MobiDBLite consensus disorder prediction 216 327 - -
Lan19g0104 327 PANTHER SPLICING FACTOR YJU2 1 327 IPR007590 GO:0000398
Lan19g0104 327 Hamap Splicing factor YJU2 [YJU2]. 1 326 IPR043701 GO:0000398
Lan19g0104 327 MobiDBLite consensus disorder prediction 309 327 - -
Lan19g0104 327 Coils Coil 173 193 - -
Lan19g0104 327 PANTHER BNAA02G14200D PROTEIN 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0104 Lan-Chr19 922749 927739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0104 - - gmx:100817564 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0104 19 922749 927739 Lan5g0751 5 19225590 19228034 LSH
Lan19g0104 19 922749 927739 Lan5g0833 5 21101811 21107933 LSH