Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0096 ATGAGTAACATAAGCATGGTAGAGGCAAAACTTCCACCTGGGTTCAGGTTTCATCCTAGAGATGAAGAACTTGTGTGTGATTATTTGATGAAGAAGGTTACTCATAGTGATTCTTCTCTCATGATTGATGTTGATCTTAACAAGTGTGAGCCATGGGATATTCCTGAAACAGCATGTGTAGGAGGGAAAGAGTGGTATTTCTACACACAAAGAGATAGAAAATATGCAACTGGGCTACGTACAAATCGTGCCACAGCCTCAGGTTATTGGAAAGCCACAGGGAAAGATAGATCAATAAAACTCAAAGGTACTCTTGTTGGAATGAGGAAAACTTTAGTGTTCTATGAAGGAAGAGCACCAAAAGGGAGAAAAACTGAATGGGTCATGCATGAATTTCGCATTGAACCTCCACATAGACCTTCTAATATTTCTTCTACCAAGATAGAAGAAGATTGGGTTTTGTGCAGGGTGTTCTATAAAAGTAGAGAAGTTATTGCAAAACCTAGCATTGGAAGTTGCTATGATGACACAGAATCTTCATCACTTCCTCAATTAGTGGACTCTTACATAAGTTTTAATAACCAATTACCTCAAAATCATGCACTTGAATATGAGCAAGTGCCCTGCTTCTCCATTTTTTCTCAAAACCAAACCAACCCTCTTAATTTCAACCACCACAACATAACCACTATGGACTCAAAATTAGTTGTTAATAACAATATTGCAACTACTTATGTAGGAACAACAAATTTGGGTTCTTACTTAGACCCTTTTTCATGTGACAAACAAGTGTTAACAGCTGTTTTGAATCAACTTACAAAGATGGAAAGAAATTCAACTAACCAAAGTCTTAAAGGGTCACCAAGCTTAGGAGAAGGAAGCTCAGAGAGTTACTTATCTGAAGTTGGTATGCCACATTTGTGGAATAATTATTGA 936 0.3729 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSSLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRSIKLKGTLVGMRKTLVFYEGRAPKGRKTEWVMHEFRIEPPHRPSNISSTKIEEDWVLCRVFYKSREVIAKPSIGSCYDDTESSSLPQLVDSYISFNNQLPQNHALEYEQVPCFSIFSQNQTNPLNFNHHNITTMDSKLVVNNNIATTYVGTTNLGSYLDPFSCDKQVLTAVLNQLTKMERNSTNQSLKGSPSLGEGSSESYLSEVGMPHLWNNY* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0096 311 MobiDBLite consensus disorder prediction 277 296 - -
Lan19g0096 311 Gene3D NAC domain 20 165 IPR036093 GO:0003677|GO:0006355
Lan19g0096 311 MobiDBLite consensus disorder prediction 277 297 - -
Lan19g0096 311 ProSiteProfiles NAC domain profile. 11 160 IPR003441 GO:0003677|GO:0006355
Lan19g0096 311 SUPERFAMILY NAC domain 2 160 IPR036093 GO:0003677|GO:0006355
Lan19g0096 311 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Lan19g0096 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 235 - -
Lan19g0096 311 PANTHER OS08G0200600 PROTEIN 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0096 Lan-Chr19 773369 778934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0096 2 309 NAC Transcription Factor Family AT1G56010 57.680 3.00e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan19g0096 NAM 1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0096 - - gmx:100301890 481.87