Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0088 ATGGCAAATCATAAGTCACCAATCAAGTTTGATATGAAAAATGTTGTGTTTGTAAAACCATCAAAACCCATTCATTCCTCTATTCTTTCTCTATCTACAGTTGATAATAGACCTGATCTTGATAGTATAAGCAAAGTTGTTTGTGTATATCAATCAACAAATAATCATGATTTCATTGTTGATCAACTTGACCCTACTTTTGTGATTAAAGAAGCACTCTCAAAGGCTTTGCTTTATTATTATCCTTTTGCAGGTAGGCTAGTTAAATATAATGATGGAAATTATAGAATCCATTTCAATGCTGATTATGGAGTTCCATTCATGGAGGCTTATGCTGATTGCCACCTTTCTTCTCTTCAGTATATGGATGGTAATGACATGGAAATTTCTAAGTACTTGGTGTTTGATCTTCCTTTAGAAGATAAAAATGGCCACCAATACCCTTTGCTGTTCAAGGTAACCAAGTTTCTTTGTGGAGGTTTTACTATTGGACTAGGCTTGTCACACAGAATCTGTGATGGGTTTGGTGGTGCAAAATTCATCAAAGCCATGGCTGAACTTGCAAGGGGTAATAGTGAGCCATTTGTGAAACCTGTGTGGGAAAGAGAGAGGTTGGTTGGTTCAATAACAACTAAGCAACCATTTCAAATTCTCTTGGATAAAGCTTCAGCTGCAACTTCACCATTTGGGCCAAACACAACTCTTGTGCATGAATGCATTAAGGTGGATTATGATAGCATAAGAAGACTCAAGATGAAGCTAGTGAAGGAAAATGAAAATGAAAATGAAACCATGGAGCATAACTTCACAACTTTTGAAGCCCTTGGTGCTTGTGTTTGGAGGTCAAGAGCTAGAGCCTTAGAACTAAACAACAAAGGGAAAACCATTTTGAGCATCACAATGGGTATGAGAGGATATTTAGATCCTCCTTTGCCTGAAGGATATTATGGAAATGCAATTATGGATGCATATTTAGCATTAACAGTGAGGGAACTAAATGAAATATCACTCTCTAAGATAGCAAAGCTAATAAGAGAGACAAAGAAGGCTAAAAATACTGTTGATTGTATCAAAAACTCAATCAACACTAGTTATCCTAGCCTCAATTATTTTAACAATTTTTGTCATGCATTCACAAGTTTAGTAGATTGGACCCATTTGGGTTTAATGGAAAAGATAGATTTTGGTGGGAATAAACTAGTGAATATGATACCAATTCCATGTGAGGAGAGTGGGTCATTGTATGAGTGTATTTTCACTCCTCCTGCTAAGTTGGATACTTCAATGAAAGGAGGAGTTAAGATTTTCTTATCTCTACCTAGTGCTGCCATGCTCAAGTTCAAGGAGGAGATGGAAGATCTAGGACTTATCAAACCATTTGCAAGAGATTGGTGGGTCAATGACAAGAGCTAG 1413 0.3666 MANHKSPIKFDMKNVVFVKPSKPIHSSILSLSTVDNRPDLDSISKVVCVYQSTNNHDFIVDQLDPTFVIKEALSKALLYYYPFAGRLVKYNDGNYRIHFNADYGVPFMEAYADCHLSSLQYMDGNDMEISKYLVFDLPLEDKNGHQYPLLFKVTKFLCGGFTIGLGLSHRICDGFGGAKFIKAMAELARGNSEPFVKPVWERERLVGSITTKQPFQILLDKASAATSPFGPNTTLVHECIKVDYDSIRRLKMKLVKENENENETMEHNFTTFEALGACVWRSRARALELNNKGKTILSITMGMRGYLDPPLPEGYYGNAIMDAYLALTVRELNEISLSKIAKLIRETKKAKNTVDCIKNSINTSYPSLNYFNNFCHAFTSLVDWTHLGLMEKIDFGGNKLVNMIPIPCEESGSLYECIFTPPAKLDTSMKGGVKIFLSLPSAAMLKFKEEMEDLGLIKPFARDWWVNDKS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0088 470 Pfam Transferase family 16 453 - -
Lan19g0088 470 Gene3D - 7 216 IPR023213 -
Lan19g0088 470 PANTHER ACYL TRANSFERASE 4 5 455 - -
Lan19g0088 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 455 - -
Lan19g0088 470 Gene3D - 220 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0088 Lan-Chr19 698683 700529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0088 8 323 Monolignol Biosynthesis Gene Families AT5G48930 32.424 2.56e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0088 K20240 - gmx:100801843 459.144