Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0086 ATGAAGCCTATTTTTCTCATGTTCTTACCTTCATTTTGGTTGATGTACCTTCATTTGTTTCTTTTCTTTACTTTGAACTCATCATTGTTTGGCCTAAACACAAATGTTTCTGCATTAGGAAATGACACTGATTACCATGCACTACTCAAATTCAAGGAATCAATATCCAATAACCCTTTGTATTCTTGGAATAGTTCCACTCACTTCTGCAACTGGCCAGGAATTACATGCAATTCCATGCATGAAAGAGTTCTCATGTTGAACCTAGAAGGATATGACTTGCATGGATCCATATCTCCTGCACTTGGCAATCTGTCATTCCTGAGAATCCTTAGCCTCCAAAACAACGGCTTCGGCGGAAAAATTCCACAAGAAGTTGGTCTATTGGTACAACTGCAGACACTCTATCTCAACAATAACTCGTTGATAGGGGAAATTCCAACAAACCTAACAAGTTGTACTAAACTCGAAAACATCGACTTGTCGTTGAACAATTTGGTTGGGAAATTACCTAATGAAATTGGCTCTCTTAGGATGCTTAGAGAATTTAGCATTGTCACAAACAAAATAGAAGGACAAATTCCACCATCCATTGGGAATCTTACATCAATGTCCCATCTTGTGCTAGGTGATAATAACTTAGAGGGACATATTCCACAAGAAATAGGCCATTTGAGAAAGTTGATATTTCTAGACATATACTCGAATAAACTATCCGGTATGCTCCCATCTACTGTTTACAATATGTCATCTCTCATTACATTCTCAGCTTCAGTCAACCGATTTAATCAATCTCTTCCATCAAACATCTTCCACACTCTCCCTAATCTACAAGAATTTGACATCGGTGCAAATCAAATCTCGGGTCCAATCCCAACGTCCATCACGAACGCGTCTGTTCTTCGACTACTTGATATCGATGGAAGCCATTTTGTAGGAAAATTTCCAAATGTAGGGAAGCTCTGTGATCTTAGGATAGTGAGTGCATCTAATAACCATCTAGGTAGCAATTCAAGTAAGGACTTGGATTTTTTAAGTCCATTGACAAATTGTAGTAAGTTGAGGGTGCTATCTATATCCTACAATAATTTTGGGGGGGTTTTACCAAATTTTATAGGAAATTTTTCTACCCAAATGAGTCAATTATATCTTGGTGGTAATGATATATCTGGAAAGATACCTTCAGAGTTAGGAAATCTAAATAGTTTAATTCTTTTGACCATGGAATTTAACCATTTGTATGGTACTATTCCATCTACATTTGGAAAATTTCAGAAGATGCAAAAGTTAGAATTAGAAGGAAACAAACTTTCAGGACAGATATCACCCTTCATAGGCAACCTCAGTCAATTGTTTTTCTTACATTTAGGAGACAATATGTTAGAAGGAAGTGTCCCTCCAAGTTTAACAAAGTGTCAAAAGTTACAATATCTAAATCTTTGTCAAAACAACCTTAAAGGTACTATACCATTAGAGGTTTTTAGTCTTTTCTCTTTAACTTCATTGAACTTGTCACAAAACCTATTGAGTGGTAATCTACCTGGTGAAGTTGGAAAGCTTAAAAATATTGAGGAATTTGATGTCTCTAAGAATCATCTATCTGGTAAGATTCTTGGAACTATAGGAGAATGCTTGAGCTTGGAGTACCTTTCTTTGCAAGGAAATTCCTTTCATGGAATCATACCTTCTTCTTTGGCTTCATTGAAAGGCTTAAGAGGTTTAGACCTATCACAAAACCACTTCTCCGGGTCAATTCCGGAAGGTTTGCAACATATTTCTACTCTAGAGTACTTGAATGTTTCTTTCAACATGTTGGATGGTGAGGTACCAACAGAAGGTATCTTTCGAAATGCAAGCGGATTCGCCGTGTCAGGTAATAGAAAGCTTTGTGCAGGTATTTCGGAGTTACATCTACCACCATGCCCTGCCAAAGAAAGAAAATTTGTAAAACACCATAATCATACAAGGTTGATTGTAGTGATAGCTTGTGTTGTTGCTTTTCTTCTCATATTGTTATCTTGTGTAACTATCTACTGGATGAAGAAAAGAAATAAGCAACCATTTTCTGACTCATCAGCAATTAACCAACTGCCTATGGTTTCATACAAAAGCCTGCACGACGGAACGGATGGATTCTCGGCTAGAAACTTAATAGGATTTGGAAATTTTGGCTCTGTCTACAAAGGAACTCTTGAGTCAGAAGACAAAGTTGTTGCAATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCATAAGAGTTTCATGGCTGAATGTAATGCATTAAGAAATATTAGGCATCGAAATCTGGTTAAGATCTTAACATGTTGTTCCAGTATCGATTACAAGGGTCAAGAATTTAGAGCTCTTGTTTCTGAATTCATGACAAATGGAAGCTTAGAAAGTTGGTTGCACCCAGCAATGGAAATTTCAGATCAACCAAAAGCTTTGGACCTTGAACAAAGATTAAATATCATTACCGATGTTGCTTCCGTGTTACATTATCTTCACTACGAATGCGAGCAAGCTATCGTTCATTGCGATTTAAAGCCAAGCAATATTCTTCTAGATGAATGCTTTGTAGCTCATCTCACTGATTTTGGCTTAGCAAAATTGCTCTCAAGTATTGGAGTCTCTCCAATGCAAAGTAGCACAGTTGAAATAAAAGGGACTATTGGTTATGCTGCTCCAGAATATGGAATGGGTTCACGAGTGTCAATCGAAGGCGATATGTATAGTTTTGGAATTCTAGTTTTGGAGATGTTAACCGAAAGAAGACCTACAGACGAAACATTTAAAGATGGTCGAAATCTTCATGACTATGTCAAAATTTCGATACCGAATCATCTTTCGCAAATTATGGACCGAACTATTCTCCTTGAGGACAGTGATAAGTTGACCCTTATGGATCGTAATGTAAGGGAATGTTTACATTCACTTTTTAGGATTGCACTTGCATGTTCAGTGGAATCACCAAAAGAAAGAATGAGTATGGTTGGTGTCATAAGGGAGCTTAATCTGATAAAAAGTTCCCTTCTGAGATCAATGAATGCATTACAAACACAACAGAGAACATAG 3075 0.3707 MKPIFLMFLPSFWLMYLHLFLFFTLNSSLFGLNTNVSALGNDTDYHALLKFKESISNNPLYSWNSSTHFCNWPGITCNSMHERVLMLNLEGYDLHGSISPALGNLSFLRILSLQNNGFGGKIPQEVGLLVQLQTLYLNNNSLIGEIPTNLTSCTKLENIDLSLNNLVGKLPNEIGSLRMLREFSIVTNKIEGQIPPSIGNLTSMSHLVLGDNNLEGHIPQEIGHLRKLIFLDIYSNKLSGMLPSTVYNMSSLITFSASVNRFNQSLPSNIFHTLPNLQEFDIGANQISGPIPTSITNASVLRLLDIDGSHFVGKFPNVGKLCDLRIVSASNNHLGSNSSKDLDFLSPLTNCSKLRVLSISYNNFGGVLPNFIGNFSTQMSQLYLGGNDISGKIPSELGNLNSLILLTMEFNHLYGTIPSTFGKFQKMQKLELEGNKLSGQISPFIGNLSQLFFLHLGDNMLEGSVPPSLTKCQKLQYLNLCQNNLKGTIPLEVFSLFSLTSLNLSQNLLSGNLPGEVGKLKNIEEFDVSKNHLSGKILGTIGECLSLEYLSLQGNSFHGIIPSSLASLKGLRGLDLSQNHFSGSIPEGLQHISTLEYLNVSFNMLDGEVPTEGIFRNASGFAVSGNRKLCAGISELHLPPCPAKERKFVKHHNHTRLIVVIACVVAFLLILLSCVTIYWMKKRNKQPFSDSSAINQLPMVSYKSLHDGTDGFSARNLIGFGNFGSVYKGTLESEDKVVAIKVLNLQKKGAHKSFMAECNALRNIRHRNLVKILTCCSSIDYKGQEFRALVSEFMTNGSLESWLHPAMEISDQPKALDLEQRLNIITDVASVLHYLHYECEQAIVHCDLKPSNILLDECFVAHLTDFGLAKLLSSIGVSPMQSSTVEIKGTIGYAAPEYGMGSRVSIEGDMYSFGILVLEMLTERRPTDETFKDGRNLHDYVKISIPNHLSQIMDRTILLEDSDKLTLMDRNVRECLHSLFRIALACSVESPKERMSMVGVIRELNLIKSSLLRSMNALQTQQRT* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0086 1024 Pfam Protein kinase domain 715 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0086 1024 SMART LRR_sd22_2 424 450 - -
Lan19g0086 1024 SMART LRR_sd22_2 496 525 - -
Lan19g0086 1024 SMART LRR_sd22_2 274 300 - -
Lan19g0086 1024 SMART LRR_sd22_2 568 591 - -
Lan19g0086 1024 SMART LRR_sd22_2 129 161 - -
Lan19g0086 1024 Gene3D Ribonuclease Inhibitor 319 649 IPR032675 -
Lan19g0086 1024 PANTHER LRR RECEPTOR-LIKE KINASE 29 1014 - -
Lan19g0086 1024 SMART serkin_6 712 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0086 1024 SMART LRR_typ_2 448 472 IPR003591 -
Lan19g0086 1024 SMART LRR_typ_2 568 591 IPR003591 -
Lan19g0086 1024 SMART LRR_typ_2 274 298 IPR003591 -
Lan19g0086 1024 SMART LRR_typ_2 496 520 IPR003591 -
Lan19g0086 1024 SMART LRR_typ_2 201 225 IPR003591 -
Lan19g0086 1024 SMART LRR_typ_2 129 153 IPR003591 -
Lan19g0086 1024 Gene3D Ribonuclease Inhibitor 40 318 IPR032675 -
Lan19g0086 1024 SUPERFAMILY L domain-like 346 630 - -
Lan19g0086 1024 PANTHER OS04G0122200 PROTEIN 29 1014 - -
Lan19g0086 1024 Pfam Leucine rich repeat 546 605 IPR001611 GO:0005515
Lan19g0086 1024 ProSiteProfiles Protein kinase domain profile. 712 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0086 1024 Pfam Leucine rich repeat N-terminal domain 42 78 IPR013210 -
Lan19g0086 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Lan19g0086 1024 SUPERFAMILY L domain-like 45 334 - -
Lan19g0086 1024 Pfam Leucine Rich Repeat 131 152 IPR001611 GO:0005515
Lan19g0086 1024 Pfam Leucine Rich Repeat 353 375 IPR001611 GO:0005515
Lan19g0086 1024 Gene3D Phosphorylase Kinase; domain 1 692 793 - -
Lan19g0086 1024 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Lan19g0086 1024 Gene3D Transferase(Phosphotransferase) domain 1 794 1023 - -
Lan19g0086 1024 SUPERFAMILY Protein kinase-like (PK-like) 686 1004 IPR011009 -
Lan19g0086 1024 CDD STKc_IRAK 718 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0086 Lan-Chr19 682675 686385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0086 41 1014 Receptor kinase-like Gene Family AT3G47570 44.894 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lan19g0086 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0086 - - gmx:100792724 1277.31