Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0084 ATGGGTGTACATGAAGATTTCATGAAGGAAGATGAGTATGATGTTCCACTTCCAGGGTTTCGATTTCATCCCACTGATGAAGAACTTGTTAGTTTCTATCTTCGTAGGAAGCTTGAAGAGAAACCCATCAATATTGAACTTATCAAAGAGATTGATATCTATAAACATGATCCTTGGGATCTTCCAAAAGTTAGTGGTAATGGAGGAGAGAAAGAAGGATACTTCTACTGCCAAAGAGGGAGGAAGTATAAGAACAGCGTAAGGCCGAATAGGGTTACAGGCTCAGGGTTCTGGAAAGCAACCGGAATAGATAAGGGAGTATACTCGCATGGAGGAAAAGGTAATGACTGCATTGGACTCAAGAAAACACTTGTCTACTATAGTGGCAATGCTGGCAAAGGAACCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCATCAAATAATGACACCATCACAAACAAGAATAATGCAGATATTGCCCAAGAAGCTGAAATTTGGACACTGTGTAGGATTTTCAAAAGAAATGTGTCACAAAGAAAACACATACCATACATGAGATCAAATTCAGCTTCTAAGCATCATGACAATATTAACATGAGCAACAGAAAGAACATTGAGGATTCAGAAGCATATATCAATTTTGGTGCAAGTCTTAGCCATTTTCAGAATGAACAGAAGCATGTTAATAACTATCCAATGAATCAGTTTCATGTAGGTCAGTTAAGCTCTCAAGTGGCACAAAAACCTCAACTAACTGCACCATCTTATAACTTCTGGACTAACCCTTCTGTGACTAATGACTTCTTCATGTTTGAGAATTGGGATGAACTTGGATCAGTTGTGAAGTTTGGTGTTGATTCACCTAGCTTGTAA 879 0.3857 MGVHEDFMKEDEYDVPLPGFRFHPTDEELVSFYLRRKLEEKPINIELIKEIDIYKHDPWDLPKVSGNGGEKEGYFYCQRGRKYKNSVRPNRVTGSGFWKATGIDKGVYSHGGKGNDCIGLKKTLVYYSGNAGKGTKTDWMMHEFRLPSNNDTITNKNNADIAQEAEIWTLCRIFKRNVSQRKHIPYMRSNSASKHHDNINMSNRKNIEDSEAYINFGASLSHFQNEQKHVNNYPMNQFHVGQLSSQVAQKPQLTAPSYNFWTNPSVTNDFFMFENWDELGSVVKFGVDSPSL* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0084 292 Pfam No apical meristem (NAM) protein 18 146 IPR003441 GO:0003677|GO:0006355
Lan19g0084 292 ProSiteProfiles NAC domain profile. 16 176 IPR003441 GO:0003677|GO:0006355
Lan19g0084 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 287 - -
Lan19g0084 292 Gene3D NAC domain 25 182 IPR036093 GO:0003677|GO:0006355
Lan19g0084 292 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 8 287 - -
Lan19g0084 292 SUPERFAMILY NAC domain 16 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0084 Lan-Chr19 671195 673041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0084 14 275 NAC Transcription Factor Family AT5G39820 44.604 7.27e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan19g0084 NAM 2.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0084 - - lang:109334083 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0084 19 671195 673041 Lan9g0208 9 2546154 2549497 LSH