Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0082 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCACCATGTGCAGCATGCAAGCTTCTTAGAAGGAGATGTTCAAAGGATTGTGTTTTTGCACCTTATTTCCCTGCAGATGAGCCTCATAAGTTTGGTAGTGTCCACAAGGTTTTTGGGGCTAGTAATGTCAACAAAATGCTACAGGAATTACCAGAACATCAACGAAGCGATGCGGTTAGTTCGATGGTGTATGAAGCAAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGCAGGAGCCATATCTTCTCTGCAGCAACAGGTTGATGTGCTTCAGACCCAATTGGCATTAGCACAAGCAGAGGTTGTCCACATGAGAATGCACCAATTCTCAGCTTCATCAAATCAGCACCACCAATCAGTGCCTCATGTTGCATCCAATTCATCATCACAGAATTTGTACCAAACAAGCAGGACTCTATCTTCTCAGACCAAGTCCCTTTTTGGCATGGACATGGTTGTTGATCAGACCAACATGGACCACTCCTTGTGGTCATGCTAG 534 0.4532 MKEGGRKQGAMSPCAACKLLRRRCSKDCVFAPYFPADEPHKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCAGAISSLQQQVDVLQTQLALAQAEVVHMRMHQFSASSNQHHQSVPHVASNSSSQNLYQTSRTLSSQTKSLFGMDMVVDQTNMDHSLWSC* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0082 177 Coils Coil 92 112 - -
Lan19g0082 177 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Lan19g0082 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 173 - -
Lan19g0082 177 MobiDBLite consensus disorder prediction 122 145 - -
Lan19g0082 177 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Lan19g0082 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0082 Lan-Chr19 652173 655515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0082 1 177 AS2 family AT1G31320 66.102 7.41e-70 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan19g0082 LOB 9.3e-43 No_clan