Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0080 ATGAAGCAGTTGATCCGCCGTTTCTCGCGAGTCGCCGACTTCCCTCGCTACACTCGCCTCCGCTCCGAGAACCCGCACCCTCGCCGCTTCCGGCGGAATCACAAGATCCGCCACTCGTCCTCCGACGTGCCGGAGGGACACGTGCCGATCTACGTCGGCGACGAGATGGAGCGGTTCGTCGTGAGCACTGAGCTCTTCCACCACCCGATCTTCGTGAAGCTTCTGAATCAGTCGGCGCAGGAATACGGTTACGAACACAAAGGCGTTCTCCGATTGCCGTGCCACGTCATCGTATTTGAGCGCGTGCTCGACGCGCTTCTACTAGGCCACGACACGCGAGAAATTCAAAAAATGCTCAGTTTATCGGCGGAAGAGTTGAGTGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGTTTGAAGAGGAAAATATGGAATGGTAA 441 0.551 MKQLIRRFSRVADFPRYTRLRSENPHPRRFRRNHKIRHSSSDVPEGHVPIYVGDEMERFVVSTELFHHPIFVKLLNQSAQEYGYEHKGVLRLPCHVIVFERVLDALLLGHDTREIQKMLSLSAEELSAEEEEEEEEEKFEEENMEW* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0080 146 MobiDBLite consensus disorder prediction 124 146 - -
Lan19g0080 146 Coils Coil 116 145 - -
Lan19g0080 146 Pfam Auxin responsive protein 24 106 IPR003676 GO:0009733
Lan19g0080 146 MobiDBLite consensus disorder prediction 125 146 - -
Lan19g0080 146 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 123 IPR003676 GO:0009733
Lan19g0080 146 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0080 Lan-Chr19 635587 636286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0080 42 106 Calmodulin-binding Proteins AT3G43120 40.000 1.05e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0080 K14488 - lang:109333785 253.062