Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan19g0077 | ATGCAACAAAACCTAAGGTTGTGTGATAAGAGAGAGATTACCATGGGAAAAGGAAGAGCACCATGTTGTGATAAGACTCAAGTTAAGAGAGGACCTTGGAGCCCTGAAGAAGATCTCAAACTCATAGCTTTTATTCAGAAAAATGGCCATGATAATTGGAGATCTCTCCCCAAACAATCAGGGCTTTTGCGGTGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTCAGACCTGATGTAAAGAGAGGCAATTTTACAATACAAGAAGAGGAAGCCATAATAAGACTACATAAGGACTTTGGAAATAAGTGGTCAAAGATTGCATCCTGTTTGCCTGGTAGGACTGACAATGAGATCAAGAATGTGTGGAACACTCACTTAAAGAAAAGATTGAGTATCCAAAGTTCTGAATCTAGCACAGATGAATCCAAACTTGAATCATCAATAACTTCCTCTTCCTCATCTTTATCTGAATCATTGTCCTCAAATGATGCACCAAATCTAGCAGCAAAGACTATTCCTAGTAATGAACTAAATGAACAAGAAACCCTAGAAACAATGAATGATAAAATTGAACAACATTCAGAAAAACAAATATCCAATGAAGTTATTAGCATCATTGAGGACCCAAAAGAGTTAACAACTTCACTCTCTTTTGTTGAATCAAATATCCTTAACTCAAACCACATTGTTGCTTTCACACCAGAACAACAATTATGTTCTCCATTAACCAATCTAGAACCCTATGATGCTGACAATAATAATACATTGCAAGAGGTTGATAAACCAAACCATCTTAATGAAATACCATGGGATTTAGATGATGATATTTGGAAGATGGTAGATAACTTTGTATCAATGCAATCAAATGAAGTCCAATTAGAGGGGGTCCCATCAAACCAAATCTCAAATCCTATAGAAGAGAGTGTTCAAGATGTTGAAACCATGAAATGGTTCCATGAATTTGATAATGTGTTTGGATTAGTAGGTGAAACAAATGAATCTAACAAAGATGGGTATCTACCAAAGAATTATTCATCTGAACTAGGAGTGGACCCTCAAACATTTGATTTGGATGTTATGGAAAGTACAGAATCTGAATTAGATTTGAGTTATATTCAATTATGGCTCATGGCCTGA | 1143 | 0.3578 | MQQNLRLCDKREITMGKGRAPCCDKTQVKRGPWSPEEDLKLIAFIQKNGHDNWRSLPKQSGLLRCGKSCRLRWINYLRPDVKRGNFTIQEEEAIIRLHKDFGNKWSKIASCLPGRTDNEIKNVWNTHLKKRLSIQSSESSTDESKLESSITSSSSSLSESLSSNDAPNLAAKTIPSNELNEQETLETMNDKIEQHSEKQISNEVISIIEDPKELTTSLSFVESNILNSNHIVAFTPEQQLCSPLTNLEPYDADNNNTLQEVDKPNHLNEIPWDLDDDIWKMVDNFVSMQSNEVQLEGVPSNQISNPIEESVQDVETMKWFHEFDNVFGLVGETNESNKDGYLPKNYSSELGVDPQTFDLDVMESTESELDLSYIQLWLMA* | 381 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan19g0077 | 380 | ProSiteProfiles | Myb-like domain profile. | 25 | 77 | IPR001005 | - | |
Lan19g0077 | 380 | CDD | SANT | 85 | 128 | IPR001005 | - | |
Lan19g0077 | 380 | ProSiteProfiles | Myb-like domain profile. | 78 | 128 | IPR001005 | - | |
Lan19g0077 | 380 | Gene3D | - | 85 | 154 | - | - | |
Lan19g0077 | 380 | MobiDBLite | consensus disorder prediction | 134 | 181 | - | - | |
Lan19g0077 | 380 | CDD | SANT | 32 | 77 | IPR001005 | - | |
Lan19g0077 | 380 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 78 | 132 | IPR017930 | - | |
Lan19g0077 | 380 | PANTHER | - | 15 | 335 | - | - | |
Lan19g0077 | 380 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 15 | 335 | - | - | |
Lan19g0077 | 380 | Pfam | Myb-like DNA-binding domain | 83 | 128 | IPR001005 | - | |
Lan19g0077 | 380 | Pfam | Myb-like DNA-binding domain | 30 | 77 | IPR001005 | - | |
Lan19g0077 | 380 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 25 | 77 | IPR017930 | - | |
Lan19g0077 | 380 | Gene3D | - | 23 | 82 | - | - | |
Lan19g0077 | 380 | SUPERFAMILY | Homeodomain-like | 28 | 124 | IPR009057 | - | |
Lan19g0077 | 380 | SMART | sant | 82 | 130 | IPR001005 | - | |
Lan19g0077 | 380 | SMART | sant | 29 | 79 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan19g0077 | Lan-Chr19 | 591358 | 594290 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan19g0077 | 15 | 335 | MYB Transcription Factor Family | AT1G79180 | 42.655 | 5.41e-75 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lan19g0077 | Myb_DNA-binding | 5.7e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan19g0077 | K09422 | - | gmx:100101836 | 427.943 |