Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0074 ATGCAACCAAGAATGCAGAAACATCAATACAATACCACGGAACCTAGGAACGATGAATTCCATCCTGCGCCACAGTCGATCCATCAAGACCATCTTGATGGCGTGCATATCAATACACGACTTTCGGCCTCCAACATGCCCGAAAATAAACCTATACTGAATTACTCCATACAGACTGGTGAGGAATTTTCTCTTGCATTTATGAGAGACAGGGTTAACCTGAGGAATCCCGTCTTTCCAAATGTCGTGGGTAATCCCAATTATGCAACAGGGTATATGGAATTGAAAGGCATTTTAGGCCATACAGGATCGGATAGTGGGTCTGATATTTCTATACTCACAAAAGTAGAAAAAGGTCCTAAAGACAGAAGTAGTTATAAATCAGCTCAATCAATTCCTAGAACTTCATCCAATCAAGACAATAACCGAGTCCTCCAGAGTATTGCCTCTTCTGGATCTTCGGGAAGCTCATCGATGAAGGTGAAGGTTCTATGCAGCTTTGGTGGTAGAATATTACCACGACCAGGTGACGGTAAGCTTAGATATGTTGGGGGTGAAACGCGTATTATTAGTATAAGAAAGGACATTCGTTGGCCGGAGCTTATGCATAAAATGTCATCAATCTATAATGAGGTTCATGTAATGAAGTATCAGCTACCTGGTGAAGATCTTGATGCCTTAGTTTCAGTATCTTCTGATGAGGATCTATGGAATATGATGGAAGAATGTCATGAGCTACAAAGCCGAAGAGGGTCACTAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTGAATGACACTCAGTTTGGTCTCGGTAGCATTGGTGGTGATTCTGAAATGGAGTATGTAGTTGCTGTTAACGGCATGGACTTGGGATCGAGAAACAACTCAATTCTCCTTGGAGCAAGCAGTTCTACCAATCATCTACATGAACTGGATGGACAGAATATTGAGAGGGGAACCAGCAGAGTTCCCGAAGAATCATTTGTTAACCCGTCTTTGACAATTCAATCTTCGGAACCGATGGTACAAACATCCTCAAATGCTTATGAAACCTATCCATTGTTTTACAATGACCAGGTCATTCACCATGGGGAAACTAGTCAATATCCAAAACACAACTACCTTGAACCTTCCAACAACGCTCCTCGCAGTCTCGGAGAGATTCCAGTTTCTGTGTCTACCCCTGATCTTGTTAACCAAGGTACTATGAATGAAGGGAAAAACTCAGATTTTCCAACAATTCAGGTGAAAAGAAAGGGTGATAGTTTCATTCATTCAGGCAGCGAGGGCAATTTGCAAGGTAACGTTTCAGAGGCGTCAGTTACAATTGCATTATCAGAAGGGAATCATCCTACACTGCCATCAACAAATAAAGGTAAACACCAGCAGTTTGAAGATGCTTCTTCATTGGTTAGTACTATGAATCCGACACAGACTCTTAAATCTGGTGAAGATGATACTGTACCTACTGATGCATTTCGGGATGCTCAGGTTGATGCCGAGTCCAATTTTATTGATTTCAGTTACCTTGAACCACCTCCACTTCCCAGTAGAGTCTATTATTCTGAGAGAATTCCCAGGGAGCTGGAAGATTTGCTGAACCGATCTACGAAGTCAGATGATGCATATGGTTCTCATTTACTCATAACAGATTTACTTTCTGACTTCAACCAGAAGAATCCAGTTACAGAATCCAGTGACATATATCATGGTGGGAATCTGTCAAATCTGAATAAAGTGTCCGGCTCCGAAGCAAATACCTTGCAAGTAGATGGCCATACCGATGGCGAGTGGTTTTCCCAACTGAAGTACAATAAGGTACCTGATGCAGCAGGTCAGGTAAATTCAGAGCAGAAGCAGGTTTTATCAGAGAACAAAGTTTATAGCAATCAGGATCATGTCCTTAGTTCTGAAAAGGAAACGAGTCGCGCCAAAGATAATCATAACATTCTCCAAGTTGATGAAACCAGGGGCACTGAACATCCTTCATTTCCCCGGGTCCCCTCTGTTGGACGCAATGAGAATAAAGGATCTAAACTTCCAGACCTTAATATGAGTGAAGTTTCTACCAAGGAATCTAATAACAATATTAAGGTCCAAGAAAAGCCTCTAGTTTTAACTGAAAACAGAAGCCAAGATGTTTCTCAAGATTCTCCCTTGGATGCTAAATCCAGAACTGCCGAGGGTGACATTCTGATTGATATCGATGACAGGTTTCCCCGTGATTTCTTTTATGAAATGTTCTCAAAGGCGATACTTTCTGAAGATTCACCAAACGTTGGTTCACTATCAGCAGATAGAGTAGGTTTGAGCTTAAACGTGGACAATCATGAGCCTAAACGTTGGTCATTTTTTCAGAAGCTGGCCCAAGAGGGGTTCGATAATGTGTCTTTAATTGATCAGGATAATCCTGGTTTTTCATCTGGCCTAAGAAATGTAGAAGAAGGAAATAGTAAGTCTCAGCAATCTGCTCCTCTACCAGCAGATGGTGTTTTGGCCGGACACAAGGAATCCTACCCGAATTTTGGCGAAGAAAATCAGAAAAACTTACCTGTAACAACTACAACGGAGATCACTGTTTTTCATCCAAAACATGACCATTCCCAAATTAAGGGCAACGAAAAGACGAACGTCGATGCTACGATTGAAAACATAAGACCAGAGGAGTGTGATTATCAGGTTCAGGATGCGAAGAATGAAACAAGGAGTGTGGATCTACCCCGACAAGATCCTTCTTTTGTGAATTTTGACATCAGTACTCTGCAGCTCATAAAGAATGATGATCTTGAAGAGCTGCGAGAACTAGGTTCTGGTACCTTCGGGACTGTGTATCATGGGAAATGGCGAGGATCCGATGTTGCAATTAAAAGAATAAAGAAAAGCTGTTTCGCTGGTAGATCATCAGAACAAGAGAGACTGACTGTAGAGTTCTGGCGAGAAGCTGATATACTGTCCAAGCTTCACCATCCAAATGTAGTGGCTTTTTATGGCGTAGTTCAGGATGGACCTGGAGCCACATTAGCAACTGTTACAGAGTTCATGGTGGATGGTTCTCTTAGGCATGTTTTGCTTCGTAAGGATAGGCCTCTTGATCGTCGTAAGAGACTAATAATTGCCATGGACGCAGCTTTCGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATCTGCTTGTGAATTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGCGATTTTGGCCTTTCAAAAATTAAGAGAAATACCCTTGTTTCTGGTGGCGTGCGCGGAACTCTACCTTGGATGGCACCCGAGCTGCTGAATGGTAGCAGCAATAGGGTTTCCGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTGTTATGGGAGATTCTTACCGGTGAGGAGCCATATGCAAATATGCACTATGGTGCAATCATAGGAGGTATTGTAAATAACACACTAAGACCTACGATCCCCGGTTATTGCGATATCGAATGGAGAACACTAATGGAGCAATGCTGGGCACCAAATCCTTCAATCAGGCCATCCTTCACAGAAATTGCTCGCCGCTTGCGAGTGATGTCGGCATCTGCTAGTCAGACCAAGGGACATGGCCACAAGGCATCTAAATCATAA 3645 0.4219 MQPRMQKHQYNTTEPRNDEFHPAPQSIHQDHLDGVHINTRLSASNMPENKPILNYSIQTGEEFSLAFMRDRVNLRNPVFPNVVGNPNYATGYMELKGILGHTGSDSGSDISILTKVEKGPKDRSSYKSAQSIPRTSSNQDNNRVLQSIASSGSSGSSSMKVKVLCSFGGRILPRPGDGKLRYVGGETRIISIRKDIRWPELMHKMSSIYNEVHVMKYQLPGEDLDALVSVSSDEDLWNMMEECHELQSRRGSLKLRMFLFSINDLNDTQFGLGSIGGDSEMEYVVAVNGMDLGSRNNSILLGASSSTNHLHELDGQNIERGTSRVPEESFVNPSLTIQSSEPMVQTSSNAYETYPLFYNDQVIHHGETSQYPKHNYLEPSNNAPRSLGEIPVSVSTPDLVNQGTMNEGKNSDFPTIQVKRKGDSFIHSGSEGNLQGNVSEASVTIALSEGNHPTLPSTNKGKHQQFEDASSLVSTMNPTQTLKSGEDDTVPTDAFRDAQVDAESNFIDFSYLEPPPLPSRVYYSERIPRELEDLLNRSTKSDDAYGSHLLITDLLSDFNQKNPVTESSDIYHGGNLSNLNKVSGSEANTLQVDGHTDGEWFSQLKYNKVPDAAGQVNSEQKQVLSENKVYSNQDHVLSSEKETSRAKDNHNILQVDETRGTEHPSFPRVPSVGRNENKGSKLPDLNMSEVSTKESNNNIKVQEKPLVLTENRSQDVSQDSPLDAKSRTAEGDILIDIDDRFPRDFFYEMFSKAILSEDSPNVGSLSADRVGLSLNVDNHEPKRWSFFQKLAQEGFDNVSLIDQDNPGFSSGLRNVEEGNSKSQQSAPLPADGVLAGHKESYPNFGEENQKNLPVTTTTEITVFHPKHDHSQIKGNEKTNVDATIENIRPEECDYQVQDAKNETRSVDLPRQDPSFVNFDISTLQLIKNDDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEFMVDGSLRHVLLRKDRPLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGYCDIEWRTLMEQCWAPNPSIRPSFTEIARRLRVMSASASQTKGHGHKASKS* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0074 1214 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 117 294 - -
Lan19g0074 1214 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 470 1213 - -
Lan19g0074 1214 MobiDBLite consensus disorder prediction 632 698 - -
Lan19g0074 1214 MobiDBLite consensus disorder prediction 681 698 - -
Lan19g0074 1214 MobiDBLite consensus disorder prediction 125 142 - -
Lan19g0074 1214 MobiDBLite consensus disorder prediction 638 663 - -
Lan19g0074 1214 ProSiteProfiles Protein kinase domain profile. 931 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0074 1214 CDD STKc_MAP3K-like 937 1194 - -
Lan19g0074 1214 PANTHER SERINE-THREONINE PROTEIN KINASE 117 294 - -
Lan19g0074 1214 PANTHER SERINE-THREONINE PROTEIN KINASE 470 1213 - -
Lan19g0074 1214 SUPERFAMILY Protein kinase-like (PK-like) 918 1193 IPR011009 -
Lan19g0074 1214 PRINTS Tyrosine kinase catalytic domain signature 1013 1026 IPR001245 GO:0004672|GO:0006468
Lan19g0074 1214 PRINTS Tyrosine kinase catalytic domain signature 1050 1068 IPR001245 GO:0004672|GO:0006468
Lan19g0074 1214 PRINTS Tyrosine kinase catalytic domain signature 1121 1143 IPR001245 GO:0004672|GO:0006468
Lan19g0074 1214 PRINTS Tyrosine kinase catalytic domain signature 1165 1187 IPR001245 GO:0004672|GO:0006468
Lan19g0074 1214 MobiDBLite consensus disorder prediction 11 26 - -
Lan19g0074 1214 Pfam Protein tyrosine and serine/threonine kinase 932 1194 IPR001245 GO:0004672|GO:0006468
Lan19g0074 1214 SMART PB1_new 175 260 IPR000270 GO:0005515
Lan19g0074 1214 MobiDBLite consensus disorder prediction 115 142 - -
Lan19g0074 1214 ProSitePatterns Protein kinases ATP-binding region signature. 937 962 IPR017441 GO:0005524
Lan19g0074 1214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1056 1068 IPR008271 GO:0004672|GO:0006468
Lan19g0074 1214 CDD PB1_UP2 164 260 - -
Lan19g0074 1214 SUPERFAMILY CAD & PB1 domains 177 267 - -
Lan19g0074 1214 MobiDBLite consensus disorder prediction 1 26 - -
Lan19g0074 1214 Gene3D Phosphorylase Kinase; domain 1 924 1018 - -
Lan19g0074 1214 MobiDBLite consensus disorder prediction 808 832 - -
Lan19g0074 1214 Gene3D - 179 261 - -
Lan19g0074 1214 Gene3D Transferase(Phosphotransferase) domain 1 1019 1213 - -
Lan19g0074 1214 MobiDBLite consensus disorder prediction 808 827 - -
Lan19g0074 1214 SMART serkin_6 931 1197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0074 1214 Pfam PB1 domain 177 260 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0074 Lan-Chr19 568294 574941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0074 23 572 MAP Kinase Kinase Kinase AT1G16270 37.893 6.29e-87 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lan19g0074 PK_Tyr_Ser-Thr 2.9e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0074 19 568294 574941 Lan5g0771 5 19597495 19608363 LSH
Lan19g0074 19 568294 574941 Lan9g0198 9 2384827 2393598 LSH