Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0063 ATGGAAAGAATGTTCCCTCCTAAGAAGCCCTCTACTATGAATTCTCATGACAGACCCATGTGTGTTCAAGGGGACTCGGGTCTTGTCCTTACAACTGACCCAAAACCTCGCCTACGTTGGACTGTTGAACTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGCCCAGATAAGGCAACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACTCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGACTTGGCAAGCAGCCCCACAAGGAATTCAATGATCACTCGATTAAGGATGCTTCAGCTTTAGAACTGCAACGAAATACTGCTTCCTCTTCTGCCATGATCGGCCGCAACATGAATGAGATGCAAATAGAGGTGCAGAGAAGATTGCATGAACAACTTGAGGTTCAAAAACACCTTCAGCTAAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGCATCTGCTGCCACTAACATGAAGGGTATGGTACCTCATCAAGGAATCCATGACATGGGAATCATGAAAGAATTTGGTTCTCCTCTTAATTTCTCTTCTTTCCAAGATCTTGACATTTTTGGAGGTGACCAACTTGATCTTCAGCCAAACATGGAGAAGCCACCCCTTGATGGGTTTATGTCAATCAATGAAAACTTGTGCCTTGGGAAAAAGAGACCAAACCCTTATAGTGGTAGTGGAAAGAGCCCTTTGATTTGGAGTGATGATCTTAGGCTTCAAGATTTAGGGACAGCCTCATCATGCCTTGGCCCTCAAGATGACCCTTTCAAAGGTGGCCAGATTCAACTTGCACCAGCATCAATGGATAGAGGCACTGAGATTGATCAAATATCAGAGATGTATGACACAAAGCCCTCACTTTATGGGGATGAGAAGAAATTTGATGCATCTATGAAGCTTGATAGGCCATCACCAAGAAGGACAACTCTTCAAGCAGAAAGAATGAGTCCTATGATCAGCACTGGCTCCATGGCACAAGGTAGAAGCTCACCATTTGGGTGA 1080 0.4435 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNMKGMVPHQGIHDMGIMKEFGSPLNFSSFQDLDIFGGDQLDLQPNMEKPPLDGFMSINENLCLGKKRPNPYSGSGKSPLIWSDDLRLQDLGTASSCLGPQDDPFKGGQIQLAPASMDRGTEIDQISEMYDTKPSLYGDEKKFDASMKLDRPSPRRTTLQAERMSPMISTGSMAQGRSSPFG* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0063 359 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Lan19g0063 359 MobiDBLite consensus disorder prediction 1 20 - -
Lan19g0063 359 Gene3D - 34 92 - -
Lan19g0063 359 MobiDBLite consensus disorder prediction 311 359 - -
Lan19g0063 359 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Lan19g0063 359 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Lan19g0063 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 311 IPR044848 GO:0003700
Lan19g0063 359 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Lan19g0063 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 311 - -
Lan19g0063 359 MobiDBLite consensus disorder prediction 311 334 - -
Lan19g0063 359 MobiDBLite consensus disorder prediction 335 359 - -
Lan19g0063 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0063 Lan-Chr19 489495 491759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0063 4 359 G2-like Transcription Factor Family AT1G79430 58.021 1.80e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan19g0063 Myb_DNA-binding 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0063 - - ccaj:109805894 619.772