Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0060 ATGGAAGATCAAGAGCAACATGAGATAAGGTTTTCTTGTGAAACCCATCAATTAAGTTTCTCAAATTCTAATAATAACTCAAAAGAAAGCACTGAGAATGAAGGAGGAGGATACATAGGAAAAACTCTTGAGAAGGAAGAGAAGGAAGAGAAGTTATGTGAGTCAGGTCATGAAATACGTAAACGTGTTAAGAGAGAAAAGAGACAAAAGACAAGAAACTTGTTTTCAACTCTTCATGGTTTGATTCCTCAGCTTCCTTCTAAGGTGAACCGAATAAACATTGCCAGTGAAGCAATAAACTACATCAAAAGTCTAGAGCAAACAGTGCAAAAACTTGAAAAACAAAAACAAGAAAGGCTTCATTCTATTAACAGATTCATGTGTGAATCATCTGAAATGGTAATGGGAAATCCTTCAAATTCAACCTTAGCTTCAATCCCTCATCAACCTGTGAAATTTCAAGCATTTAGTTCTCCAAATGTAGTATTGAATATTTATGAGAATGAAGCAAAGTTCTTTATTTACACTAGTAAGAAGCTAAACCTTTTGACTACTATTGCTTTTGTGCTTGAGAAGTTCAAGATTGAAGTCAAATGTGCTAAAATTTGGAGCAAAGATGATAAACATGGATTGATGATTCTAGCTCAGAAAAATATGGTTCCCTCGCATCAGTTTCCAAATACAACTTCAATGGAGGATGTTTACAAAGAAGCTGCTGAAGAGATTAATGTATTGATCTCTTAA 744 0.3414 MEDQEQHEIRFSCETHQLSFSNSNNNSKESTENEGGGYIGKTLEKEEKEEKLCESGHEIRKRVKREKRQKTRNLFSTLHGLIPQLPSKVNRINIASEAINYIKSLEQTVQKLEKQKQERLHSINRFMCESSEMVMGNPSNSTLASIPHQPVKFQAFSSPNVVLNIYENEAKFFIYTSKKLNLLTTIAFVLEKFKIEVKCAKIWSKDDKHGLMILAQKNMVPSHQFPNTTSMEDVYKEAAEEINVLIS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0060 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 55 105 IPR011598 GO:0046983
Lan19g0060 247 PANTHER TRANSCRIPTION FACTOR BHLH95 22 244 - -
Lan19g0060 247 SMART finulus 63 111 IPR011598 GO:0046983
Lan19g0060 247 Gene3D - 54 133 IPR036638 GO:0046983
Lan19g0060 247 MobiDBLite consensus disorder prediction 1 47 - -
Lan19g0060 247 PANTHER - 22 244 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lan19g0060 247 MobiDBLite consensus disorder prediction 13 33 - -
Lan19g0060 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 129 IPR036638 GO:0046983
Lan19g0060 247 Coils Coil 246 247 - -
Lan19g0060 247 Coils Coil 95 122 - -
Lan19g0060 247 CDD bHLH_AtbHLH_like 62 113 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0060 Lan-Chr19 473559 475657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0060 57 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 30.932 3.40e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0060 - - lang:109333868 464.922