Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0046 ATGGAAGCCAAAAATGGAGAAGTGAGAAGGCTTCACATAATCTACTTCCTTAATCACATGGGTGGTCATGCAGAACATCCTCATCTCATTCGTGTTCTCCATTTGGCTCGTAACGGAGTTTATCTCCGAGATGTTAAGAGATGGATTGGGGAATTGAGAGGAAAAGACTTGCCTGAAGCATTTTCTTGGTCCTACAAGAGGAGGTACAAGAGTGGATATGTTTGGCAGGACCTATTGGATGATGACCTCTTAACACCTATTTGTGACAATGAATACGTCCTCAAAGGATCACAAATCCACCCTACCCTATTTGAATCTCATTCACCTGATGTAAAGAAAACTTCTAGTGATATTCTTGCTGAGAAGAAATCTTCTCAAGTACAAGATTCAGAGAAGAATCAACACCAACAACAGCATCATTCTCTATTAGAAGAACAAGATCAAATTCAAGAATTGAAAACGGATAATCCAACAAAAGTTTCATCAGAAATCAACCAAGAACCATTGGTATTCAGCTCAGATAAATCATCAATAAGTGATGAATATGATGAATCATCTAAGGTTGAAGAAGAGAAGCCTTTATGGACATGCAAAGAGAATTTCAATGAAGAGATCAATGAGAAATTAGAGAACTGTTCATTGCCATTTTTGTATCACAATCTGTTGAGTAAGAAGGATAACAAAGATGAGCAGAATAAAACTGATACAGCTGATTATTCCTTTTCTTCAGCTTCATCATCATCATCTTCATCTCAATCCTCTTTTACTAAGCTCAGAAGCAATTCTGCTAGAGTTTCTAGTGCTTTCCGAAATTGGATTTCTTGTTGCACTGTTGAAACAAATGATGCAGCCTTGGTCCTGACGAACTCTTCCTTAAATGATGTCTCCAAAGAGCCTAAGAACAGACCAGAAAATAAGGATCAGATATGTAAAGGAGACATATTTGGAGGATCAGCCAAGTGTTATGGAACTACATGGAATAACCAGCACCAGCAAGAACATGGGTCTAGAAGCTGTGATGAAAGGGAAACAAACATGAGGAGAAAAAAGCTTGGTGACTTCATGAATCAAACTACTAACATACCCCCATTTCGTCTGCCAAGATGCTCGCAATGTGGAAAGTGTTTCAAGCCAGAGAAAATGCACAAACACATGAAGTCATGTAGAGGAATGAAAGCCATGAGAATGTTTGCTTCATCTGCTTCTGAGAAGACACAGATCAATACCTTTTGA 1233 0.3844 MEAKNGEVRRLHIIYFLNHMGGHAEHPHLIRVLHLARNGVYLRDVKRWIGELRGKDLPEAFSWSYKRRYKSGYVWQDLLDDDLLTPICDNEYVLKGSQIHPTLFESHSPDVKKTSSDILAEKKSSQVQDSEKNQHQQQHHSLLEEQDQIQELKTDNPTKVSSEINQEPLVFSSDKSSISDEYDESSKVEEEKPLWTCKENFNEEINEKLENCSLPFLYHNLLSKKDNKDEQNKTDTADYSFSSASSSSSSSQSSFTKLRSNSARVSSAFRNWISCCTVETNDAALVLTNSSLNDVSKEPKNRPENKDQICKGDIFGGSAKCYGTTWNNQHQQEHGSRSCDERETNMRRKKLGDFMNQTTNIPPFRLPRCSQCGKCFKPEKMHKHMKSCRGMKAMRMFASSASEKTQINTF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0046 410 MobiDBLite consensus disorder prediction 157 176 - -
Lan19g0046 410 PANTHER F3F20.2 PROTEIN 3 403 - -
Lan19g0046 410 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 3 403 IPR010369 -
Lan19g0046 410 MobiDBLite consensus disorder prediction 236 255 - -
Lan19g0046 410 MobiDBLite consensus disorder prediction 157 185 - -
Lan19g0046 410 MobiDBLite consensus disorder prediction 122 142 - -
Lan19g0046 410 MobiDBLite consensus disorder prediction 228 255 - -
Lan19g0046 410 Pfam Protein SOSEKI, plant 12 255 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0046 Lan-Chr19 346099 349313 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan19g0046 DUF966 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0046 - - gmx:100785001 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0046 19 346099 349313 Lan5g0726 5 18500250 18503873 LSH