Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0042 ATGGCTTACAGACGTAGCCTCTTGATAAGAGGGAACCTTGATCGGAAATGCCGCTCGTCTTTCGGTTATGTTATCCATAGTGATGAACGGAAACATGAACACCCTGATGAAAAATCATCTTCAGTAGGTATTAGTAACTTTATCCAAAAAAGGTCCTTTGTTAGCTCTCTTAATGGATCTATGGGGTTTAATACCTCGTCTCGAGGTACAATGCTTTCAAACAGATTCCTTGCTCCGTGCTCTGGATATGATTTCTGCCGATATATGTCAACTGCCAATCAGGGTTCCGATAAGATTGATATAATGACCGATGTAGCTGAGGTTCTTTCTGACACGACTGTAGAAGCTGTAGCTTCTCAGGCTCCCATTGTTAATGAAGTTGCAATTGCTGCTGCTGATTCATATTTACCAGTGAAGTTCTTGCAGTACACTATAGATGCTGTCCATTGCTACACTGGCTTAAACTGGTGGGCAGCCATAGTTCTATCAACCCTAGTGATTCGGAGTGCAACAGTTCCACTCTTAATAAATCAACTAAAGGCCACTTCTAAGCTTTCGCTAATGAGGCCTAAGATGGAGGCGATAAGGGAACGGATGCAAGAACAGGCCATGGATCCTGCAGCTGTTGCTGATGGTCAGAAGGAATTCAAGAAGCTATTCAAAGAATATGGTGTGAGTCCGTTTACGCCATTGAAAGGGCTCTTTATTCAAGGTCCTATCTTTGTCAGTTTTTTCCTTGCGATAAACAATATGGCTGAGAAGGTGCCATCATTTAAGCAAGGTGGAGCCTTCTGGTTTATGGATCTCACTACTCCAGATACCTTATACGTTCTTCCAGTTTTGACTGCATTATCATTCTTAATAACAGTAGAGTGTAATATGCAAGAAGGCTTGGAAGGAAACCCTGTCGCTGGCACCATGAAAAATGTCTCTAGGGGTCTTGCTGTTCTTACAGTTCCTTTTACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGGTGACATCAAATTTGTTTTCGCTTGTTTATGGACTTGTGCTTAAAGTCCCTGGGGTAAAGAAAACTTTGGGTCTTCCTGAAATGCCTGCACCAGCACCTGCTACTACTACTACTACCAGTGCTCCACAATCTCCCTTTTCTATATTTCCAGCACTAAAAAAAGCAGCATCTGTGACAAATGGGTCAAATTCATTGCCAAATGAAGCACCAAAACTTTCAGATAAAAAGATATCTTCTTCTTCTGTTATCAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTTAAAGGAAGAAAGAAAAACAACAAGAAATGA 1311 0.4119 MAYRRSLLIRGNLDRKCRSSFGYVIHSDERKHEHPDEKSSSVGISNFIQKRSFVSSLNGSMGFNTSSRGTMLSNRFLAPCSGYDFCRYMSTANQGSDKIDIMTDVAEVLSDTTVEAVASQAPIVNEVAIAAADSYLPVKFLQYTIDAVHCYTGLNWWAAIVLSTLVIRSATVPLLINQLKATSKLSLMRPKMEAIRERMQEQAMDPAAVADGQKEFKKLFKEYGVSPFTPLKGLFIQGPIFVSFFLAINNMAEKVPSFKQGGAFWFMDLTTPDTLYVLPVLTALSFLITVECNMQEGLEGNPVAGTMKNVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGVKKTLGLPEMPAPAPATTTTTSAPQSPFSIFPALKKAASVTNGSNSLPNEAPKLSDKKISSSSVISQRLRSLEKQVKGRKKNNKK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0042 436 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 155 345 IPR028055 -
Lan19g0042 436 MobiDBLite consensus disorder prediction 391 436 - -
Lan19g0042 436 Coils Coil 420 436 - -
Lan19g0042 436 MobiDBLite consensus disorder prediction 391 421 - -
Lan19g0042 436 Pfam 60Kd inner membrane protein 156 345 IPR001708 GO:0016021|GO:0032977
Lan19g0042 436 PANTHER OXA1 73 408 IPR001708 GO:0016021|GO:0032977
Lan19g0042 436 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 73 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0042 Lan-Chr19 321222 327301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0042 136 354 Chloroplast and Mitochondria Gene Families AT2G28800 26.293 2.64e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0042 K03217 - gmx:100817052 634.795