Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0041 ATGGCATCAAGACCCATCGTTCCACTTCAACAACAACAAGCCAGAGGTGAGGGGGTCATAGGAGGAAGGAAGAAGCGTGTAGTACTTGGTGATATTGGGAATTTGGATCGTGTTAAAGGCGCCAATATCAATCTCAATCGCCCCATCACAAGGAGTTTATGTGCACAACTACTTGCCAAAGCAGAAGCTGGTGAAAATAACAAGAATGTGGCTATTCCTAATGTAACCGGTCCAAAGCCTCAAGTTGCTGATGAAGTTGTTGCTAAAAGAAGAGTGGCACCAAAGCCAGCAGAGAAGAAAGTCACTGCAAAACCAAAGCCTGTTGAAGTCATTGAAATCAGCCCGGACAAAGAGGTTCAAAACGACAAGTTTGTAAACAAGAACAAGGAAGGAGATGCTCTCTCCAAAAAGAAATCACAAACACTTACTTCAGTCCTCACAGCTAGAAGCAAGGCAGCATGTGGTTTGACTAAAAAACCAAAGGAGCAGATTGTCGACATTGATGCTGGCGATAGTGGCAATGAACTTGCCGCTGTGGAATATATTGAAGATATGTACAAGTTCTATAAGCTAGCAGAGAATGAGAGCCATCCACATCAGTATATGGATTCACAACCTGAGATAAACGAGAGGATGAGAGCCATATTAGTTGATTGGCTGATAGATGTTCACACCAAATTTGACCTTTCACCTGAAACCCTTTACCTCACCATCAACATAGTTGATCGGTTCCTCGCAGTCAAGACTGTGCCAAGGAGGGAACTGCAATTGGTTGGTGTTAGTGCCATGCTCATGGCATCCAAGTATGAAGAAATCTGGCCCCCTGAGGTTAATGACTTTGTATGCCTCACAGATAGAGCATACACTCATGAACAGATACTAGTCATGGAGAAAATCATTCTAGGAAAGCTGGAATGGACTTTGACTGTGCCTACACCTTTTGTTTTCCTTACTCGTTTTATCAAGGCATCGGTTCCAGATCAAGAGTTGGAAAACATGGCTCATTTCTTTTCAGAGTTGGGAATGATGCATTATGCCACCTTAGTGTATTGTCCCTCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGGTGCACTTTGAACAAGACCCCTATTTGGAATGAAACACTTCAACTACATACCGGTTATTCAGAAGAACAACTCATGGATTGTGCCAGGTTGTTGGTAAGCTTCCATTCCACACTTGTGAATGGAAAGCTTAAGGTTCTGTATAGGAAGTATTCGGACCCGCAAAGACGAGCCGTAGCGATGCTTCCTCCGGCTAAGAATCTGATGCCTGAAAATTCTTGTGGGTCTAGAGTTTGA 1326 0.4367 MASRPIVPLQQQQARGEGVIGGRKKRVVLGDIGNLDRVKGANINLNRPITRSLCAQLLAKAEAGENNKNVAIPNVTGPKPQVADEVVAKRRVAPKPAEKKVTAKPKPVEVIEISPDKEVQNDKFVNKNKEGDALSKKKSQTLTSVLTARSKAACGLTKKPKEQIVDIDAGDSGNELAAVEYIEDMYKFYKLAENESHPHQYMDSQPEINERMRAILVDWLIDVHTKFDLSPETLYLTINIVDRFLAVKTVPRRELQLVGVSAMLMASKYEEIWPPEVNDFVCLTDRAYTHEQILVMEKIILGKLEWTLTVPTPFVFLTRFIKASVPDQELENMAHFFSELGMMHYATLVYCPSMVAASAVFAARCTLNKTPIWNETLQLHTGYSEEQLMDCARLLVSFHSTLVNGKLKVLYRKYSDPQRRAVAMLPPAKNLMPENSCGSRV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0041 441 Gene3D - 304 437 - -
Lan19g0041 441 Pfam Cyclin, N-terminal domain 184 308 IPR006671 -
Lan19g0041 441 PANTHER CYCLINS 17 434 IPR039361 -
Lan19g0041 441 SMART Cyclin_C_2 311 428 IPR004367 -
Lan19g0041 441 Gene3D - 198 303 - -
Lan19g0041 441 CDD CYCLIN 309 396 IPR013763 -
Lan19g0041 441 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 17 434 - -
Lan19g0041 441 SUPERFAMILY Cyclin-like 310 429 IPR036915 -
Lan19g0041 441 CDD CYCLIN 212 301 IPR013763 -
Lan19g0041 441 ProSitePatterns Cyclins signature. 213 244 IPR006671 -
Lan19g0041 441 Pfam Cyclin, C-terminal domain 311 427 IPR004367 -
Lan19g0041 441 SMART cyclin_7 315 397 IPR013763 -
Lan19g0041 441 SMART cyclin_7 218 302 IPR013763 -
Lan19g0041 441 SUPERFAMILY Cyclin-like 174 308 IPR036915 -
Lan19g0041 441 PIRSF Cyclin_A_B_D_E 4 439 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0041 Lan-Chr19 314856 320149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0041 1 432 Core Cell Cycle Gene Families AT4G37490 53.201 1.22e-147 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0041 K21777 - gmx:547919 637.106