Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0039 ATGTGGAAATTTAAGCCTTTCATGAACAAAGAGCCAGCTGGGCTTGAAGGCCGCTCTATAGATGTTGGTAATGTTAAAATACATGTTCAGAAGGCCATTGCTGAAGGAGGGTTCTCTTGTGTCTACTTAGCTCGTGATGCTGTACATATGTCAAAACAATATGCTTTAAAGCACATAATATGCAATGATGAAGAATCACTTGCATTGGTAAAGAAGGAGATATCTGTGATGAAGACATTGGTAGGACATCCCAATGTTGTCACACTTCTTGCACATACAATCTTTGATATGGGTAGGACAAAAGAGGCATTCATTGTGATGGAATTTTGTGAGAAGTCTTTGGTTACTGTGCTGGAGAGCCGAGGATCTGGATATTTTGATGAGAAACAGATTCTATTAATCTTCAGGGATGTATGTAATGCAGTTTTCGCTATGCACTGCCAGTCCCCTCCTATTGCTCACCGAGACTTGAAAGCAGAGAATCTTTTACTTAGTTCAGATAGTGTATGGAAGTTGTGTGATTTTGGAAGCACTACCACCAATCACAAACGTTTTGAGAAACCAGAAGAAATGGGAATTGAGGAAGACAATATCAGGAAATACACAACCCCTGCCTACAGGGCCCCCGAGATGTGGGATTTGTTCCTGAGAGAAGTCATTAATGAGAAAGTGGACATATGGGCACTCGGATGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCATTTGATGGAGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTACCTAAATACAGTTCATCTATCACGGACTTAATCAGAGACATGCTTCAAGCTAAACCAGCTGACAGACCTGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAGCTACCTAATAATTTGCAGAAGTCATTACCTGACAGGCCACCTGAATTGCCGTCTTCAAACTGTCATGAAGGCGCTTCCTTGGCCACAAATAAATCACCTCCAATGCCTCGTAGGGATCCACCTCCTCCACCTGCATCTGGAGAACCCAGAAATACATCACAGCTATCCCTTGCTTCTGGGGGAAGTGGAAGTGGGGGGCCACTTGGTGCTTTCTGGTCCTCTCAACATGCAAAGGATTCACTTGTCTCAGAGGAAAAGAGGAAACCAATATTTGATGATGAACAATCTAGCCACCATATCTCATTGAAACATGATGTGATTCGTCCAGACAATGATCAATCACCCAAGAATATTGTTAGTGGTAACAGAGTGGTTAACACTCAAACTCATACTGTAAAAAGCAACACACATGGAAAACCACACAAGCCTGACACTAGATCTTCAAAGGACTTTGAAATAAACTTTTTTCAGGATAAAGATCACACAAGTGAAGGTCGAAAGTCAAGTGTGGAGAATACAGCTACCTTTCAGGATAGGACTTTTAACTCCTTTGTTGCCGAATTTGATAACAGTAAGTTCAACTCTGGACTTGGTAACAAAACTGAAAAGGAGGAAGCATTAGAGGCTGAGATAGAGAAACTCAAGGAGCAACTGAAGGAAACTAAGTTGGAAAAGGCTGAAATAACTTCAAAATATGAAAAACTTTCTGCCATCTGCCGATCACAAAGGAATGAATTACATGATCTCAAGCAAGCACTTGCTGCAAGAACTCCTTCGCCAAGTAAAGGTGGATTGAGAACCTCTCCAGGAACTACTTCACCTGCATATGTGACAGAGAAGATCGGAATGGTTGAGGAACTTAAGCAGAATAAAACTGAATGGAAAACTCCTACTTCAGAACCCAAGTCATGGCAAGCTTTTCCTGAAGAACCCAAACCACTAAAGTCCCTTTCAGCAGAGAATACTTCCAAATCTGTCAGGACAAGAAACGGTCAGCAGATTAAGCAGGCTGCTCAACTAGCTACCGATTTCGATACATGGGGTTTTGGAACAGATAACTTCAGTGCTGTTGGTGCTGGCAGCCCCCAGATGTTAAAACCTGGTGAAGGGAGCAATTCTCATGGTTTCAGTGATGGAAAAGCTTTAGACAACAAGACAACCTCTCAACCTGGTGGATGGGCTGGTTTTTAA 2079 0.4214 MWKFKPFMNKEPAGLEGRSIDVGNVKIHVQKAIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLALVKKEISVMKTLVGHPNVVTLLAHTIFDMGRTKEAFIVMEFCEKSLVTVLESRGSGYFDEKQILLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLSSDSVWKLCDFGSTTTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSITDLIRDMLQAKPADRPDITQVWFRVNEQLPNNLQKSLPDRPPELPSSNCHEGASLATNKSPPMPRRDPPPPPASGEPRNTSQLSLASGGSGSGGPLGAFWSSQHAKDSLVSEEKRKPIFDDEQSSHHISLKHDVIRPDNDQSPKNIVSGNRVVNTQTHTVKSNTHGKPHKPDTRSSKDFEINFFQDKDHTSEGRKSSVENTATFQDRTFNSFVAEFDNSKFNSGLGNKTEKEEALEAEIEKLKEQLKETKLEKAEITSKYEKLSAICRSQRNELHDLKQALAARTPSPSKGGLRTSPGTTSPAYVTEKIGMVEELKQNKTEWKTPTSEPKSWQAFPEEPKPLKSLSAENTSKSVRTRNGQQIKQAAQLATDFDTWGFGTDNFSAVGAGSPQMLKPGEGSNSHGFSDGKALDNKTTSQPGGWAGF* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0039 692 MobiDBLite consensus disorder prediction 330 344 - -
Lan19g0039 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Lan19g0039 692 CDD STKc_GAK_like 26 298 - -
Lan19g0039 692 MobiDBLite consensus disorder prediction 673 692 - -
Lan19g0039 692 SUPERFAMILY Protein kinase-like (PK-like) 28 342 IPR011009 -
Lan19g0039 692 MobiDBLite consensus disorder prediction 584 628 - -
Lan19g0039 692 Coils Coil 493 548 - -
Lan19g0039 692 MobiDBLite consensus disorder prediction 612 628 - -
Lan19g0039 692 MobiDBLite consensus disorder prediction 300 368 - -
Lan19g0039 692 MobiDBLite consensus disorder prediction 387 407 - -
Lan19g0039 692 MobiDBLite consensus disorder prediction 551 570 - -
Lan19g0039 692 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0039 692 MobiDBLite consensus disorder prediction 409 430 - -
Lan19g0039 692 MobiDBLite consensus disorder prediction 654 692 - -
Lan19g0039 692 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0039 692 MobiDBLite consensus disorder prediction 387 446 - -
Lan19g0039 692 Pfam Protein kinase domain 28 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan19g0039 692 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 679 - -
Lan19g0039 692 PANTHER SERINE/THREONINE PROTEIN KINASE 1 679 - -
Lan19g0039 692 Gene3D Transferase(Phosphotransferase) domain 1 11 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0039 Lan-Chr19 304061 308443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0039 4 284 MAP Kinase Kinase Kinase AT4G24480 26.990 8.07e-20 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lan19g0039 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0039 K08853 - gmx:100808507 998.423