Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0037 ATGGCCAAAACAAGTTGTTTAGCTCTTATATCCCTTCTTATTTTCTCATTCTTTATGGCTGAAATCCATGGAAGCAAACAAGGTCAAGTTCTTGGCATGTTTCAAAAGTTAAAATACAAAGCAGGTTCAGAAATTGATAGGAGTGAGTTTAATGCACAAGAAGAGGTTGTGGTTGATAATTATTATGACATGGTTAATTCTCAAAAGGGTCTTAAAGAGAAAGATAAGATTGTTAAATTACCAGGGCAACCACATGTAAATTTCTCACAATATGGAGGGTATGTCACAATTGATAAATTTGCAGGGCGTGCCTTGTATTATTACTTTGTGGAAGCTCAACATTCTAAAGAGAAAATGCCTCTTCTTCTTTGGCTAAATGGAGGTCCGGGATGTTCATCTCTTGCTTATGGAGCAATGGAAGAACTTGGACCCTTTAGAGTAAACAGTGATGGGAAGACACTAAAGAATAATAGATATTCATGGAACTATGCTGCAAATGTTTTGTTCCTTGAGTCACCTGCTGGAGTAGGATTTTCTTACTCAAATAAATCATCAGATTATGATAGTAGTGGAGATAGGAAAACATCAACAGATAATTATGTATTCTTAGTCAAATGGTTGGAAAGGTTTCCTGAGTATAAGAAAAGAGATTTCTACATTGCTGGAGAGAGCTATGCTGGACATTATGTCCCTCAACTTGCTCATACTATTCTACACAATAACAAAAAGTCTAACAACACAATAATCAACCTCAAAGGAATCATGATTGGGAATGCAGTGATCAATGATAAAACAGATAATCTAGGAATGAATGATTATCTTGCTAGCCATGCAATCATATCAGATAAAGCAGCACATGATATGAACACATTCTGTAATTCTCCATCCAATGACATTCCAATTCAATGCCAAGCAGCAATAGAGGAATATAATAGAGATACATCATTCATTGATATCTACAACATCTATGCACCACTTTGCAATAATCCCAACCTCACTGCTTTCCCTAAGAAGAGCTCTATTGTTACTGATCTATGTAGTGGTGTTTATACCCATGCATATCTTAACCGTGCTAATGTTCAAGAGGCCATGCATGCCAATGTCACAAAACTCAAATATGAATGGGAATCATGCAGTAATATTTTATTCTCAAAGTGGCATGATAGCCCCTCAACAATCATTCCCCTTTTAAAGGAATTCCTCAATAATGGACTCAGAGTTTGGATTTTTAGTGGTGACACAGATGGAAGAGTGCCTGTTACTTCAACCAAGTATTCTATTAAAAAGATGAATCTCTCTACTAAAACTGCTTGGTATCCATGGTTCTTCAATGGAGAGGTTGGTGGGTATGCTGAAGTGTACAGTGGGGGCCTAACATTTGCAACAGTGAGAGGAGCAGGGCATGAAGTTCCTAGCTACCAACCAGGAAGGGCACTTTCATTGATCATGCACTTCTTAAAGGGCACTCCACTTCCCACTACTAAAACACAACCTTAA 1497 0.3741 MAKTSCLALISLLIFSFFMAEIHGSKQGQVLGMFQKLKYKAGSEIDRSEFNAQEEVVVDNYYDMVNSQKGLKEKDKIVKLPGQPHVNFSQYGGYVTIDKFAGRALYYYFVEAQHSKEKMPLLLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLKNNRYSWNYAANVLFLESPAGVGFSYSNKSSDYDSSGDRKTSTDNYVFLVKWLERFPEYKKRDFYIAGESYAGHYVPQLAHTILHNNKKSNNTIINLKGIMIGNAVINDKTDNLGMNDYLASHAIISDKAAHDMNTFCNSPSNDIPIQCQAAIEEYNRDTSFIDIYNIYAPLCNNPNLTAFPKKSSIVTDLCSGVYTHAYLNRANVQEAMHANVTKLKYEWESCSNILFSKWHDSPSTIIPLLKEFLNNGLRVWIFSGDTDGRVPVTSTKYSIKKMNLSTKTAWYPWFFNGEVGGYAEVYSGGLTFATVRGAGHEVPSYQPGRALSLIMHFLKGTPLPTTKTQP* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0037 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 492 IPR001563 GO:0004185|GO:0006508
Lan19g0037 498 Pfam Serine carboxypeptidase 82 488 IPR001563 GO:0004185|GO:0006508
Lan19g0037 498 PANTHER CARBOXYPEPTIDASE 8 492 - -
Lan19g0037 498 Gene3D alpha/beta hydrolase 71 329 IPR029058 -
Lan19g0037 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 458 475 IPR033124 GO:0004185
Lan19g0037 498 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Lan19g0037 498 Gene3D - 393 488 - -
Lan19g0037 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Lan19g0037 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Lan19g0037 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Lan19g0037 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 458 471 IPR001563 GO:0004185|GO:0006508
Lan19g0037 498 SUPERFAMILY alpha/beta-Hydrolases 74 492 IPR029058 -
Lan19g0037 498 Gene3D - 346 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0037 Lan-Chr19 295821 299428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0037 354 491 Calmodulin-binding Proteins AT2G22960 30.935 9.21e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0037 K16297 - gmx:100783864 687.952