Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0035 ATGGCGCCGGCGAAGGTGAGAAGCCCAAGAGTGAGTAGGAACCCTGATTTGATAAGGGGAATTGGAAAGTATTCACGCTCTCAGGTGTACCACAAGAGGGGTATCTGGGCTATCAAGGCCAAAAACGGTGGCGTTTTGCCCCGTCATGACCCGAAGCCCAAGCCCGAAGCTAAGCCTGAGAAGCCACCTAAATTCTACCCTGCAGATGATGTCAAGAAGCCTCTTCTCAATAAGCATAAGCCAAAGCCCACAAAGCTCAGGGCTAGCATTACTCCTGGGACAGTGCTGATTTTGCTTGCCGGGAGATTTAAGGGAAAGAGGGTTGTTTTCTTGAAGCAACTTCCTTCTGGGTTGCTACTTGTCACTGGTCCTTTTAAGATCAATGGGGTTCCTCTAAGAAGAGTGAACCAATCTTATGTCATTGGTACATCCACCAAGGTTGATATCTCCGGGGTTAATGTTGATAAATTTGATGACAAGTATTTTTCCAAGGCAACCAAGGAAAGGAAAAAGAAGGGAGAGGGCGAGTTCTTCGAGGCTGAGAAGGAGGAGAAAAATGTGTTTCCTCAAGAGAAAAAGGATGCCCAAAAAACTGTGGACAGCACTTTACTAAAAGCCATTGAAAGTGTTCCTGACCTGAAGTCTTATTTGGGTGCTAGGTTTTCTTTGAAAGCAGGAGTGAAGCCCCATGAGTTAATTTTTTAG 705 0.4582 MAPAKVRSPRVSRNPDLIRGIGKYSRSQVYHKRGIWAIKAKNGGVLPRHDPKPKPEAKPEKPPKFYPADDVKKPLLNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFSKATKERKKKGEGEFFEAEKEEKNVFPQEKKDAQKTVDSTLLKAIESVPDLKSYLGARFSLKAGVKPHELIF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0035 234 MobiDBLite consensus disorder prediction 41 86 - -
Lan19g0035 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 - -
Lan19g0035 234 SUPERFAMILY Translation proteins SH3-like domain 88 178 IPR008991 -
Lan19g0035 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lan19g0035 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lan19g0035 234 MobiDBLite consensus disorder prediction 45 77 - -
Lan19g0035 234 Gene3D - 88 172 IPR014722 -
Lan19g0035 234 CDD KOW_RPL6 82 234 IPR041997 -
Lan19g0035 234 Pfam Ribosomal protein L6, N-terminal domain 5 62 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0035 Lan-Chr19 287512 289706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0035 3 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 79.741 9.41e-121 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0035 K02934 - gmx:100784101 386.341