Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0033 ATGGTTCGCTCCAATGGCGTCAAACTTCTTCACTGCGTTGCTCGTCGATCTCTCCCCGCAGACAAATCCATATATGAAACAATGTTCCGAAAGGGTTATAGGACATTGAATTCGGGACTTTGCAATCCATCTAGCGTTATTGGAAATCGTTCTTCAGATGTTGGATATGGTGTTAATTTGAAGAATTGGTTGCTATGGGGAGCAGCAAATACATATTGGGGGGCATCTCGGTCTATTCATGGCTCTGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGTGTGAGTAAGAACTCTAGTGCTTCTGAAATAAAGAAAGCATACTACGGGCTTGCAAAGAAGCTACATCCAGACACAAACAAAAATGATCCTGAGGCTGAGAAGAAATTTCAAGAAGTATCATTGGCATATGAGGTTTTGAAGGATGAGGAAAAGCGTCAACAGTATGATCAGGTTGGCCATGATGCGTATGTAAACCAACAAAGCACTGGTTTTGAAGGAAACGGCGGCTTTAATCCATTTGAGCAGATATTTCGCGACCATGATTTTGTCAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGACTTATCCTTTATGGAAGCTGTTCAAGGATGCACTAAAACTGTTACATTTCAAACAGATTTACTTTGTAATACTTGTGGAGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGCTGTAAAGGCGCAGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAGCATACTTGTGGTACATGCAAAGGAACTGGCAAAATTGTATCGAGTTTCTGCAAGTCATGCAGGGGTGCGAAGGTTATGAAAGGAACAAAGTCGGTCAAGTTGGATATTATGCCTGGGATGGACAACAATGAGACCCTAAAGGTTTACAGAAGTGGCGGTGCAGATCCCGATGGAGACCACCCTGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCTGTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAGCCTGGTCAGAAGGTGGTTCTGAAAAAGAAAGGAATCAAGACAAAAAATTCTTACAGTTTTGGAGATCAATATGTTCATTTTATTGTCAGCATCCCCACAAATCTGACAGAGAGGCAGCGTGAATTGATAGAAGAATTTTCCAAGGAAGAGCAAGGGGAAAGTGATAAACAGAAAACTGCTTCAGCTTCAGGTTGA 1329 0.4244 MVRSNGVKLLHCVARRSLPADKSIYETMFRKGYRTLNSGLCNPSSVIGNRSSDVGYGVNLKNWLLWGAANTYWGASRSIHGSAPLAKDFYDVLGVSKNSSASEIKKAYYGLAKKLHPDTNKNDPEAEKKFQEVSLAYEVLKDEEKRQQYDQVGHDAYVNQQSTGFEGNGGFNPFEQIFRDHDFVKSFFHQNIGGEDVKAFIDLSFMEAVQGCTKTVTFQTDLLCNTCGGSGVPPGTRPETCKRCKGAGVTYVQAGPFRMEHTCGTCKGTGKIVSSFCKSCRGAKVMKGTKSVKLDIMPGMDNNETLKVYRSGGADPDGDHPGDLYVTIKVREDPVFRREGSNIHVDAVLSITQAILGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKKKGIKTKNSYSFGDQYVHFIVSIPTNLTERQRELIEEFSKEEQGESDKQKTASASG* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0033 442 Pfam DnaJ central domain 224 284 IPR001305 GO:0031072|GO:0051082
Lan19g0033 442 PRINTS DnaJ domain signature 90 108 IPR001623 -
Lan19g0033 442 PRINTS DnaJ domain signature 108 123 IPR001623 -
Lan19g0033 442 PRINTS DnaJ domain signature 125 145 IPR001623 -
Lan19g0033 442 PRINTS DnaJ domain signature 145 164 IPR001623 -
Lan19g0033 442 CDD DnaJ_C 195 413 - -
Lan19g0033 442 Pfam DnaJ C terminal domain 201 410 IPR002939 -
Lan19g0033 442 Gene3D DnaJ domain 85 196 IPR036869 -
Lan19g0033 442 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 421 IPR008971 GO:0006457|GO:0051082
Lan19g0033 442 SMART dnaj_3 87 145 IPR001623 -
Lan19g0033 442 ProSiteProfiles Zinc finger CR-type profile. 211 289 IPR001305 GO:0031072|GO:0051082
Lan19g0033 442 Pfam DnaJ domain 88 150 IPR001623 -
Lan19g0033 442 Gene3D - 197 326 - -
Lan19g0033 442 SUPERFAMILY HSP40/DnaJ peptide-binding domain 194 332 IPR008971 GO:0006457|GO:0051082
Lan19g0033 442 Gene3D - 224 284 - -
Lan19g0033 442 PANTHER DNAJ-CLASS MOLECULAR CHAPERONE 29 442 - -
Lan19g0033 442 CDD DnaJ 88 142 IPR001623 -
Lan19g0033 442 SUPERFAMILY Chaperone J-domain 87 189 IPR036869 -
Lan19g0033 442 Hamap Chaperone protein DnaJ [dnaJ]. 85 438 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lan19g0033 442 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 286 IPR036410 -
Lan19g0033 442 ProSiteProfiles dnaJ domain profile. 88 153 IPR001623 -
Lan19g0033 442 CDD DnaJ_zf 224 284 IPR001305 GO:0031072|GO:0051082
Lan19g0033 442 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 29 442 - -
Lan19g0033 442 ProSitePatterns Nt-dnaJ domain signature. 130 149 IPR018253 -
Lan19g0033 442 Gene3D - 331 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0033 Lan-Chr19 275375 281493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0033 90 150 C2H2 Transcription Factor Family AT1G74250 45.455 8.36e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0033 K03686 - gmx:100799735 752.666