Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0024 ATGGGAAGTGCAGCGAGCACAAGTTGGTGCGCTAAAAGGCTTTATTTTGTGTCTATTTTCTTTTTAATAATTCCCTCTTTGAAAAATATCAGATGGTCTCAAATTGCGGCACGTCTTCCAGGACGTACAGATAATGAGATCAAGAATTTTTGGAACTCTACTGTGAAGAAAAGATTGAAAACTAATAACAACATTGACTCATCAGAGCCTAGAGATCATGTTTTGGGTGGTGAGAATGGGATCATGCCCATTAATGAACATCTTAATGAACTCATGACCATGTGCATGGATTCATCTTCTTCAACTTCATCATCCATGCATGCTATGGTTTTGACTCATGACCACTTTGACCCATTTCCCATGTTGACAAATCCTTATGATATGAGTTCATGCTTAGCCAAAGTTGAGATGGTAGATGGGCTTCATGGTGATTATGGAATATTGGAGAGTAATAAAATGGGGTTAGAAAGCGACTTTTCCTTTCCTTCACTAGAAAGTAGAAGCATTGAAAATGAAAACAATAGTGCCCCTATTGATGTGAAAAGCCATAACAACCACTTCAATAATATTTGCTTCAATAACACTGAACAGATTCAGAATTCAAACGTAGAGGAACTGTTTGGTTTTGGAAACAATGGGCAAGGGGAAAACTTAAGAATGAGAGAATGGGACTTGGAGGTTTTGATGCAAGACATATCCTATTTTCCATCCTCTGATTTCCAATTTTAA 729 0.3745 MGSAASTSWCAKRLYFVSIFFLIIPSLKNIRWSQIAARLPGRTDNEIKNFWNSTVKKRLKTNNNIDSSEPRDHVLGGENGIMPINEHLNELMTMCMDSSSSTSSSMHAMVLTHDHFDPFPMLTNPYDMSSCLAKVEMVDGLHGDYGILESNKMGLESDFSFPSLESRSIENENNSAPIDVKSHNNHFNNICFNNTEQIQNSNVEELFGFGNNGQGENLRMREWDLEVLMQDISYFPSSDFQF* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0024 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 59 IPR017930 -
Lan19g0024 242 ProSiteProfiles Myb-like domain profile. 31 55 IPR001005 -
Lan19g0024 242 PANTHER TRANSCRIPTION FACTOR MYB83 30 241 - -
Lan19g0024 242 Gene3D - 20 74 - -
Lan19g0024 242 PANTHER MYB DOMAIN PROTEIN 55 30 241 - -
Lan19g0024 242 CDD SANT 30 55 IPR001005 -
Lan19g0024 242 SUPERFAMILY Homeodomain-like 29 63 IPR009057 -
Lan19g0024 242 Pfam Myb-like DNA-binding domain 31 53 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0024 Lan-Chr19 228084 230294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0024 31 242 MYB Transcription Factor Family AT3G08500 37.295 3.81e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan19g0024 Myb_DNA-binding 2.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0024 K09422 - gmx:100784755 244.588