Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0020 ATGACCCTTTTCTTCTATTTCTCTATCATCTTCCTTGTTTCTCTTGTTACTTTGAAATTCTTGTTCCAAACAAAAAAATTAAAAAACTTTCCTCCATCTCCACCTCATTTTCCTATAATCGGAAATCTCCAACAAATCAAACAACCTTTACATCAATCCTTTTATGAATTAGCCAAAAAGTATGGGAAAATATTTTCCCTAAGGTTTGGATCATGTCTTGTGGTTGTTGTTTCATCATACAAAACAGCACAAGAATGTTTTACAAAAAATGATGTTACATTTTCAAATCGACCAAAACTTCTCCTAGGCAAGTATATTGGTTACAACTATACTGCTGTAGTATTTGCCCCTTATGGAGATCATTGGCGTAACCTCCGCCGCATTATAACACTCGAGCTTCTCTCATCACACCGTCTCAACTCTTCCTTAGAAATCCGAACAGATGAAATCATGAGGCTACTACAAAAGTTAGGTCAAGTCTCATGCAAAGATTTTGTGAAAGTGGAACTAAAGTCCAAGTTCAAAGAATTAACTTTCAATACTATGATGAGAGTATTGGCAGGGAAGAGGTACTATGGTGAAGATGTTGATCCAAGTGATTTAGAGGAAGCAAATAAATTTAGAGAGATAATGAAAGAGTTAGGAAAGTTTGGAGATTTCATTCCTACAGTGTGGTCAAGGTTGTTTGATTTATTTTCGGAAAATGGTCTAAAGAAAACTGGTGAAAAACTTGATGCCTTTATACAAAAAATTGTTGATGAGCATCGTGCTCGGAAGCAAGATGATAATAGTATGATAGGTCATCTTCTAAAACAACAACAAGCACAACCCGAATATTATACGGATCAAATCATCAAAGGACTCCTCATGGATCTATTGAATGCAGGAACAGACACATCAGCAGTGACTTTAGAATGGGTAATATCTAATTTAGTAAACAATCCAGAAATATTGAACAAGTTAAGAAAAGAAATAGACACTGAAATTGGACAAGATCGTCTAATGATTGAGACAGATGTTCCAAAACTTCCATACCTTCAAAATGTTGTCTCAGAGACATTACGTTTACACCCAGCTGCTCCTTTATTGGTACCTCACTTTTCTTCAGATGAATGTACCGTTGGAGAATACAAAGTCCCAAAAGACACTACTTTGTATGTTAATATATGGGCCATTCACAGAGATCCTGATTTGTGGAAGGACCCTATGGTTTTCAGGCCAGAAAGGTTTGAGAAAGAAGGTGAAGTAAACAAGTTGATTTCATTTGGGATAGGGAGAAGAGCTTGTCCAGGGGAAAACATGGCTCAACGCACACTAACCTTAGGTTTGGGGTTATTGGTTCAGTGTTTTGATTGGAAAAGAATTGGAGAGGAATTGGTTGATCTGAGTGAAGGACAAGGGATTACTGTGCCAAAGAAATATCCCTTAGAAGCAATGTGTAGAATGCGTCACATACCAGCTACTAAGAGCTTTATCTAG 1479 0.3678 MTLFFYFSIIFLVSLVTLKFLFQTKKLKNFPPSPPHFPIIGNLQQIKQPLHQSFYELAKKYGKIFSLRFGSCLVVVVSSYKTAQECFTKNDVTFSNRPKLLLGKYIGYNYTAVVFAPYGDHWRNLRRIITLELLSSHRLNSSLEIRTDEIMRLLQKLGQVSCKDFVKVELKSKFKELTFNTMMRVLAGKRYYGEDVDPSDLEEANKFREIMKELGKFGDFIPTVWSRLFDLFSENGLKKTGEKLDAFIQKIVDEHRARKQDDNSMIGHLLKQQQAQPEYYTDQIIKGLLMDLLNAGTDTSAVTLEWVISNLVNNPEILNKLRKEIDTEIGQDRLMIETDVPKLPYLQNVVSETLRLHPAAPLLVPHFSSDECTVGEYKVPKDTTLYVNIWAIHRDPDLWKDPMVFRPERFEKEGEVNKLISFGIGRRACPGENMAQRTLTLGLGLLVQCFDWKRIGEELVDLSEGQGITVPKKYPLEAMCRMRHIPATKSFI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0020 492 Gene3D Cytochrome P450 19 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 6 482 - -
Lan19g0020 492 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 482 - -
Lan19g0020 492 Pfam Cytochrome P450 31 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Lan19g0020 492 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan19g0020 492 SUPERFAMILY Cytochrome P450 31 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0020 Lan-Chr19 198596 200243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0020 8 483 Cytochrome P450 AT4G37370 52.459 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0020 K13260 - gmx:100811727 618.616