Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0015 ATGGTTTTAGGCTTGCCAGAGGGGTCCACTGATTGTGGTGAAAAGCTAGCTAGTCTCATTTTTGAAGTGTTTATAAACTTTGCAGTATTTCTTACTATGGTCATTTTCTGCAATGGTTTACATTTCATACTAAAGCCTTATTCACAACCTCGTATTACTTCTGACATTATTGCAGGACTAGCTTTAGGTAACATTGGACGTGTACGTACCCTATTTGATAGTTTCAACAAGGCCTTTGGATTCATCATTGATTTTGGTATGATGTGTTACATGTTTGCATTGGGGATAGAAATGGATTCTCATGTACTCTTCAACCACCTACCTAGACAAACTAAAGCCGCTTATGGAGGACAAATCTTCACTTTCGTCTTATCCGCTTTGACAACGCCTTTCTTGGCGTACTTCAATCAAAATAAAATACTAGAATTCACCCTCTGTCTTGCCCTCGCTGTTTCAAGCACCGCCTCGCCTGTCCTTACCCGTTTGATAACTCATCTCAAAATAGGCAAGTCAGATATCGGGAAGATCGTCATCGCTGGAGGGATGCACTCAGATTTCATAGGATCTTTGTTCCTTTCAATTGGCTACATATTTGTTCCAATGGCATTATTCTGTGGTGATTTTGAAGCAACACAAGGTCTTAACAAGGCCTTTACAATGGCATGTGCAGTTCTGGGGCAGACAGTGTTTGCAGCTAGTTTTGGACCATTTTTCATGAATTGGATTAACAATGAAAACCCAGAAGGTAGACCAATGAAAGGTTCACATGTTATACTAGCTATTGCCTTGATGGTATTAACATGTTCCTTCTCCACAATGTATGATTATAGTCCACTTTTAAGTGCATTCCTAACAGGTGTTTGTTTGCCCCGGGAGGGTAGAGTTTCCAAATGGGTTATCACCAAAATCAATTATATATTGACAACCATATTTTTCCCCATATTTTTCTTGTGGATGGGGTATGAAGCTGACATCAAGAAGTTTCATGTCGGAAGTCGCGGAGCATGGGCAAAATTGATTACACTTATTATAGTAGGGACTGCAGGTAAGATTGCTGGAACAGTCATTTCTGGGGCAATGATGGGATTTCACTGGCCTGAATCGGTTGCAATAGGGTTGCTCCTCACCACCAAGGGTCACTTACATATCTACTTGGCTGTCAAAGCAATGAATTGTGGTGCAAATACCTCCACAGGCATTGGGATGATAATTGCAATATTTTTCACAGTTGTGCAAGGGCCAACAGTTGTGGCAAATATCATCAAACGAGCGAGGAAAAGGGCACCTAGTCACCACATGGCCCTTCAATTGCTTGACCCAACAAGTGAGCTAAGGATCCTCCTATGCCTTCATGGACCTCATAATATTCCTGCTTCCATAAACTTCATGGAGATCTCAAGAGGCTCATCAGACCCCGGCATTCTGGTATATGTTGCCGACATGATTGAACTCACTGATGACATATCAGTCACATTAGATAAGGATGAAGGAGTGCATACAACCACTGTTAAAGACAAGGAAGTCATGGACATGAGAGACAAAGTTACCGACTCATTCCAAACCTATGTGGAAGAAAACAGTGATGGTATTACTCTCAAAAGAACAATGGCACTCTCAACAATCAATAACATGCCTCAAGATATCTGTGTTTTAGCAGAGGACTTGATGATTGCCCTCATTATACTACCATTCCATAGGAGCCACCGCTCCGAAGGAACCTTGGATGGTGGTAATCAAGGGTTCAGATATGTGAACCGAAAGGTACTGAGAAGTGCCCCTTGTTCCGTTGGGATTCTAGTGGACAGAGGCCTTGGATCCATTGATCATATATCAGCATCTAAAGTAACAATCAATGTGGCAGTCATATTCATCGGAGGGAAAGATGATAGGGAAGCACTTGCCTATGCTAGCCGTGTAGCACGGCATCCAGGAGTAAAAGTAACAATAATAAGATTCTTGGTAGATCCAAATGCAGAGTCCTCAAGATTAGTCAGGTATAGGGTCATCCTTGCAGACCAAGAAAATGAGATGAAGTTGGATGACGAATACTTTGCGCATTTCTACGAAAGGCATGTAGTAGGAGGCCGTATTTCGTATACAGAGAAGCATCTAGCAAATGCTGCTGAGACATTTTCTACTCTAAGGTCATTTGAAGGACAATACTCATTGGTCATTGTTGGAAGAGAAGGTGGAATGAACTCTATATTGACAAGGGGAATGAATGATTGGCAACAATGCCCTGAACTAGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAATGACCGTATCCGTGTTGATCATCCAACAACACAAAGTTAAAGGAGATCTTGATGGATTGGATGATGACTTCTCAATCATGTAG 2370 0.4181 MVLGLPEGSTDCGEKLASLIFEVFINFAVFLTMVIFCNGLHFILKPYSQPRITSDIIAGLALGNIGRVRTLFDSFNKAFGFIIDFGMMCYMFALGIEMDSHVLFNHLPRQTKAAYGGQIFTFVLSALTTPFLAYFNQNKILEFTLCLALAVSSTASPVLTRLITHLKIGKSDIGKIVIAGGMHSDFIGSLFLSIGYIFVPMALFCGDFEATQGLNKAFTMACAVLGQTVFAASFGPFFMNWINNENPEGRPMKGSHVILAIALMVLTCSFSTMYDYSPLLSAFLTGVCLPREGRVSKWVITKINYILTTIFFPIFFLWMGYEADIKKFHVGSRGAWAKLITLIIVGTAGKIAGTVISGAMMGFHWPESVAIGLLLTTKGHLHIYLAVKAMNCGANTSTGIGMIIAIFFTVVQGPTVVANIIKRARKRAPSHHMALQLLDPTSELRILLCLHGPHNIPASINFMEISRGSSDPGILVYVADMIELTDDISVTLDKDEGVHTTTVKDKEVMDMRDKVTDSFQTYVEENSDGITLKRTMALSTINNMPQDICVLAEDLMIALIILPFHRSHRSEGTLDGGNQGFRYVNRKVLRSAPCSVGILVDRGLGSIDHISASKVTINVAVIFIGGKDDREALAYASRVARHPGVKVTIIRFLVDPNAESSRLVRYRVILADQENEMKLDDEYFAHFYERHVVGGRISYTEKHLANAAETFSTLRSFEGQYSLVIVGREGGMNSILTRGMNDWQQCPELGPIGDVLSGPDFSMTVSVLIIQQHKVKGDLDGLDDDFSIM* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0015 789 Pfam Sodium/hydrogen exchanger family 29 416 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan19g0015 789 Gene3D - 25 430 IPR038770 -
Lan19g0015 789 Gene3D - 464 742 - -
Lan19g0015 789 PANTHER CATION/H + ANTIPORTER 12 787 - -
Lan19g0015 789 PANTHER CATION/H+ EXCHANGER 3 12 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0015 Lan-Chr19 165144 168881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0015 22 789 Antiporter Super Family AT3G52080 49.042 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0015 - - cam:101501359 1096.65