Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0011 ATGGGTCTTAGAGACATAGGTGCTTCACTTCCTCCTGGGTTTCGGTTTTATCCAAGTGATGAAGAGTTGGTGTGCCATTACCTTTACAAAAAGATCACAAATGAGCAAGTTTTGAAGGGTACCTTGGTCGAAATTGACTTGCACATATGTGAACCATGGCAGCTTCCTGAGGTGGCTAAGCTGAACGCAAATGAATGGTACTTCTTCAGCTTTCGTGATCGGAAATATGCAACTGGTTTTAGAACCAATAGGGCAACAACATGTGGTTATTGGAAAGCAACGGGAAAGGATCGCATGGTGGTGGATCCAATGACACAAGAGGTTGTAGGAATGAGGAAGACATTGGTGTTCTATAGGAACAGAGCTCCAAATGGAATCAAAACTGGATGGATCATGCATGAATTTCGCTTAGAGACCCCACATATGCCTCCTAAGGAAGAGTGGGTGTTGTGTAGAGTCTTTCATAAAAGCAAAGAAGATAGCAACAATAATGCCAAATTCAACAACACACAACTCATGTATGAAATCACATCTCCATCACCAACCAACCAAACCATGATGACTAGTCATGGGTATAATAGACTTGCCTCTTTCTCTTCCTCCATGGGAATCCATCATCATTTAAACACCAATAATACCACTCTTATTACTCAATTTGCTCCAAGATGTAATGATGAATATGAATTCTTATGGGACAAGGATTTCGAACAAGTTACCTTACAAGATGGCTTGCCTTCAAACTTGGACGGAATTAGATTCGAGGTCGATGATAATAATAATAATAATAATAATATGGTCTTCTTATAA 807 0.3978 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEQVLKGTLVEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTCGYWKATGKDRMVVDPMTQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEEWVLCRVFHKSKEDSNNNAKFNNTQLMYEITSPSPTNQTMMTSHGYNRLASFSSSMGIHHHLNTNNTTLITQFAPRCNDEYEFLWDKDFEQVTLQDGLPSNLDGIRFEVDDNNNNNNNMVFL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0011 268 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Lan19g0011 268 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Lan19g0011 268 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 258 - -
Lan19g0011 268 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Lan19g0011 268 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 258 - -
Lan19g0011 268 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0011 Lan-Chr19 140093 142927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan19g0011 6 159 NAC Transcription Factor Family AT1G56010 56.790 6.37e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan19g0011 NAM 5.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0011 - - gmx:100782751 395.971