Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1166 ATGGATTCAGAAGATGTGAATTCAAAGATGAAAGATGAGGGAAACAAAAGCAGTAAAGATATGATTTTCAGAGCTGATAAAATTGATCTGAAGAGTTTGGATGCGCAGCTTGAAAAGCACTTAAGCCAGGTTTGGTCGAGAAGTAACACTGATACAAAAAGGCCTAAAGAGGTTTGGGAGATTGATTTGGCCAAATTGGATTTACGACATGTCGTAGCTAACGGAGCATATGGCATTGTTTATAGGGGCACATATGATAGCCAAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTGCTACTTCTGCCGAAACCGCTGCTTTACGAGCATCTTTTAAGCAAGAGGTTGCTGTCTGGCACAAACTTGACCACCCAAATGTTACAAAATTTGTGGGAGCTTCAATGGGAACTTCAAATCTTAAGATTCCTTTGCAAAACCCACCGAACGGTGCTCAAGATTCTCTTCCTTCTAGGGCATGTTGTGTTGTTGTTGAGTTTGTCTCTGGTGGCACATTAAAACAATACTTGATAAGAAATAGGCGGAAGAAACTTGCTTATAAAATCGTGATTCAGTTAGCTTTGGACCTCTCCAGGGGTCTTAGCTATCTACATTCAAAGAAGATTGTTCACCGTGATGTGAAAACAGAGAATATGCTCCTAGATGGTAATCAGAATCTGAAAATAGCTGATTTTGGAGTTGCGCGTGTTGAAGCTATGAATCCAAGTGACATGACTGGTGAAACTGGAACACTTGGATATATGGCACCTGAGGTTTTGGATGGTAAACCTTATAACAGGAGGTGTGATGTCTATAGTTTTGGCATTTGCTTGTGGGAGATATATTGTTGTGATATGCCTTATCCAGATCTAAGCTTTGCCGATGTGTCATCTGCGGTTGTTCGTCAGAATTTACGACCAGAAATTCCGAGGTGTTGTCCAAGTGGGTTTGCGAATATAATGAAGAAATGTTGGGATGGGAATCCAGATAAACGTCCAGAAATGGAGGATGTGGTGAGAATGCTGGAAGCACTTGATACAAGCAAAGGTGGTGGAATGATACCAGAAGATCAGCCTAAAGGTTGCTTCTGTTTTGCCCCAACCCGCGGTCCTTAA 1122 0.4198 MDSEDVNSKMKDEGNKSSKDMIFRADKIDLKSLDAQLEKHLSQVWSRSNTDTKRPKEVWEIDLAKLDLRHVVANGAYGIVYRGTYDSQDVAVKVLDWGEDGVATSAETAALRASFKQEVAVWHKLDHPNVTKFVGASMGTSNLKIPLQNPPNGAQDSLPSRACCVVVEFVSGGTLKQYLIRNRRKKLAYKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDGNQNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSGFANIMKKCWDGNPDKRPEMEDVVRMLEALDTSKGGGMIPEDQPKGCFCFAPTRGP* 374
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1166 373 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 6 366 - -
Lan18g1166 373 Gene3D Phosphorylase Kinase; domain 1 55 148 - -
Lan18g1166 373 SUPERFAMILY Protein kinase-like (PK-like) 43 344 IPR011009 -
Lan18g1166 373 SMART serkin_6 66 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1166 373 PRINTS Tyrosine kinase catalytic domain signature 167 180 IPR001245 GO:0004672|GO:0006468
Lan18g1166 373 PRINTS Tyrosine kinase catalytic domain signature 205 223 IPR001245 GO:0004672|GO:0006468
Lan18g1166 373 PRINTS Tyrosine kinase catalytic domain signature 271 293 IPR001245 GO:0004672|GO:0006468
Lan18g1166 373 PRINTS Tyrosine kinase catalytic domain signature 315 337 IPR001245 GO:0004672|GO:0006468
Lan18g1166 373 PIRSF ILK 27 353 - -
Lan18g1166 373 Gene3D Transferase(Phosphotransferase) domain 1 172 355 - -
Lan18g1166 373 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 6 366 - -
Lan18g1166 373 ProSiteProfiles Protein kinase domain profile. 66 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1166 373 Pfam Protein tyrosine and serine/threonine kinase 67 344 IPR001245 GO:0004672|GO:0006468
Lan18g1166 373 CDD STKc_MAP3K-like 75 344 - -
Lan18g1166 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan18g1166 Lan-Chr18 16431739 16434570 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1166 13 373 MAP Kinase Kinase Kinase AT3G22750 80.055 0.0 620
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan18g1166 PK_Tyr_Ser-Thr 1.5e-58 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0038 17 198953 202061 Lan18g1166 18 16431739 16434570 LSH
Lan18g1166 18 16431739 16434570 Lan6g0035 6 249566 252898 LSH