Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1162 ATGCAAAAACCCTCACTTTTCAATACTGCATTTTGCACTACCAGATTTGATTTGAAACTTGGAAGCAGTATACAATTGTTTCCAATGAGTACCGTTGGAGATTGGTCAGATGAGGAGCGCTCTGTCATTGGAGGGAAAGCAGAAATCGGATTTTTAGATTTTGAGGAAGAGAAATCTGTTTATAGTTATGCTGATAATGAAGAAGAACCAATCATTATATCTGCACCATTTGCACTTGTCGACGGGAAACCCCAATCAGTATTTGTTGGACATACTGCTGTGGATATAATAACCATTAAGAATACTACTTGTGAACCTGTGACCCTATGGAGTGTTCACATATTTGCCTCAAATCCGGCAGACTCTTTCACTCTTTCTCTGATGGAACCTCCATCAGCAAATTCAAATTCAGAAGTATGTGCACTTCAGAGCTTTTTAGAATCATTCACTTTGGAGGACAGGATGCTTCAGCCTGGTCAGACCTTAAAAGTATGGTTGTCTTGCAAAACAAAAGATATGGGCATGTACTCTTCAGTTCTGAATTTTGATCTTGGAGATAAAGTTATAGAAAGGGTGGCTTTCCTCTTAGTTGAAGACAAAATATCCAAGTCTTTGACTGCTAAGAGACCTTATTCAAAAGGAAGGAGAAAAGACAAATTTGTTGTAGAAAATGTTGTTCCAGGCTTTCGTCCTCTAGGGAAGGCAAATCGGAAATACATAAATAGGCTTCCAAAATATCAAATTCCGAGGGATGTCAGAGACTTGCTTGAGAGCAAGCAGATCCCTCAAGTTGTTGAAGAAGGTCTTAGAAAAGGCCGTTATGCTGTGTATTTCAAGACATTAGTGATAATGGAAGAAATACAATTGGAGGAAGACATGAGGACTTATGACATGGATTCTGTAACAATGAGGAAGAAATCAAATCAATTCTTGTCCATGGAGGTTCCTGGGCTTGCTGAGAGACGACCATCACTGGTTCATGGGGATTATATCTTCGCCAAGATAGCATCGGGACATGATAACAACAACAAATCCTATCAGGGATTTATCCACCGCGTCGAAGCTGATGAGATCTTTTTGAAGTTTGATCCCGAATTTCACCTTCTCCACAGAGATGGAAATCTATATAATGTTCATTTCACATATAATAGGATCAATATGAGAAGGTTATATCAAGCGGTTGAAGCGGCAGAAAGCTTGGGATCCGAGTTTCTCTTTCCATCTGCTTCATCTAAAAGGAGGTGCATCAAAACCAATGATTTGGTTCCCATATCTGGTTCTTTAAATGAGGAGCAGGAGTGTTCAATCAAGATGATTCTTGGTAGCAAAGGTGCACCACCATATCTAATTCATGGCCCTCCAGGTACGGGCAAGACAAGGACAATAGTAGAAGCAGTCCTCCAGCTCTACAAGCATCATAGGAATGCACGTGTTCTTATCTGCGCACCTTCGAATAGTGCAGCAGACTACATACTGGAGCGACTCCTTGCTCAACAGGCTGTTGAATTTCGAGAAAATGAAATATTCAGGCTCAATGCATCTACCAGGCCATATGAGGATCTCAAACCTGAGCTGATCCGCTTCTGCTTCTTTGATGATTTGATATTTAAGTGCCCCCCATTCAATGCCCTTATGCATTACAAGATTGTAATATCCACATATATGAGTGCCTCTCTTCTGTATGCCGAAGATGTTGCCCGGGGTCACTTTTCTCACGTTTTCTTGGATGAGGCTGGCCAAGCTTCAGAACCGGAAACCATGATACCTATATCCCATCTCTGCAGAAGGGAGACTGTTGTTGTTCTAGCTGGAGACCCGATGCAGTTGGGTCCAGTAGTATTTTCCAAAAATGCAGAACAGTTTGGATTGGGGAAATCATACATGGAACGGTTGTTTGAATGCGATTTGTATGACAGCGGAGATGCAAATTATGTAACTACATTGCTTAGAAACTATCGATGTCACCCAGAGATTTTATATCTCCCTTCAAAGCTGTTCTATAATGGAGAACTGATTGCATGTAGAGATCAAACAACTTTCACAGTGAGTGAAGACCTCATTCCTAATAAGGAATTCCCTATTCTTTTTTTTGGCATCCAAGGATGCGATGAAAGAGAAGGGAATAACCCATCATGGTTCAACCGAGTCGAAGCAAGTAAGGTTGTCGAAGTAGTGAAGAGGCTGATAGCTGGTGGGAATATAAGGGATGAAGACATTGGCATTATAACACCATACAGGCAGCAAGTGCTCAAAATTAAACAGACACTTGAAAATCTAGATATGCCTGATATCAAAGTTGGTAGTGTTGAGCAATTTCAAGGTCAAGAGAAGGAGGTTATTATCGTATCAACTGTTCGGTCAACCATCAAACACAATGACTTTGACAGAGTCCACTGTCTTGGCTTTTTGAGCAATCATAGAAGGTTTAATGTGGCTATAACCCGTGCGATCTCAATGCTCATTATAATTGGGAATCCTCATATTATCTGCAAGGATGATCGTTGGAGCCAAATGTTGTGGCATTGCGTGGAAAATTCATCTTATCAGGGTTGTACTCTTCCAGAAAGGCTGGAGACTTGTGATAACAGTAACAAAGGAAAGAATGCATTACCCTCTGGAAATGTAGAATGGGGTCAAGATAATGCATTACCTTCTGAAAATGTAGGTTGGGGTCAAGATGATAATGTGGAATGGGGTAAAGATAATGCATTACCTTCGGAAAATGTAGGGCGTGGCCAAGATGATAATGTAGAATGGGGTCAAGATAATGCATTACCTTCTGAAAATGTTGGATGGGGTCAAGATGATAATGTAGAATGGGGTCAAGACTCATCCCAGTTTGAGATCCCTAAACCTGTTACAGATGAAGCGGAATGGTCTGATGGGTGGAAGAATTAA 2898 0.4092 MQKPSLFNTAFCTTRFDLKLGSSIQLFPMSTVGDWSDEERSVIGGKAEIGFLDFEEEKSVYSYADNEEEPIIISAPFALVDGKPQSVFVGHTAVDIITIKNTTCEPVTLWSVHIFASNPADSFTLSLMEPPSANSNSEVCALQSFLESFTLEDRMLQPGQTLKVWLSCKTKDMGMYSSVLNFDLGDKVIERVAFLLVEDKISKSLTAKRPYSKGRRKDKFVVENVVPGFRPLGKANRKYINRLPKYQIPRDVRDLLESKQIPQVVEEGLRKGRYAVYFKTLVIMEEIQLEEDMRTYDMDSVTMRKKSNQFLSMEVPGLAERRPSLVHGDYIFAKIASGHDNNNKSYQGFIHRVEADEIFLKFDPEFHLLHRDGNLYNVHFTYNRINMRRLYQAVEAAESLGSEFLFPSASSKRRCIKTNDLVPISGSLNEEQECSIKMILGSKGAPPYLIHGPPGTGKTRTIVEAVLQLYKHHRNARVLICAPSNSAADYILERLLAQQAVEFRENEIFRLNASTRPYEDLKPELIRFCFFDDLIFKCPPFNALMHYKIVISTYMSASLLYAEDVARGHFSHVFLDEAGQASEPETMIPISHLCRRETVVVLAGDPMQLGPVVFSKNAEQFGLGKSYMERLFECDLYDSGDANYVTTLLRNYRCHPEILYLPSKLFYNGELIACRDQTTFTVSEDLIPNKEFPILFFGIQGCDEREGNNPSWFNRVEASKVVEVVKRLIAGGNIRDEDIGIITPYRQQVLKIKQTLENLDMPDIKVGSVEQFQGQEKEVIIVSTVRSTIKHNDFDRVHCLGFLSNHRRFNVAITRAISMLIIIGNPHIICKDDRWSQMLWHCVENSSYQGCTLPERLETCDNSNKGKNALPSGNVEWGQDNALPSENVGWGQDDNVEWGKDNALPSENVGRGQDDNVEWGQDNALPSENVGWGQDDNVEWGQDSSQFEIPKPVTDEAEWSDGWKN* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1162 965 MobiDBLite consensus disorder prediction 884 965 - -
Lan18g1162 965 CDD SF1_C_Upf1 654 842 IPR041679 -
Lan18g1162 965 Pfam AAA domain 624 826 IPR041679 -
Lan18g1162 965 PANTHER RNA HELICASE SDE3-RELATED 34 861 - -
Lan18g1162 965 Gene3D - 540 637 IPR027417 -
Lan18g1162 965 Gene3D - 358 534 IPR027417 -
Lan18g1162 965 PANTHER DNA2/NAM7 HELICASE FAMILY 34 861 IPR045055 -
Lan18g1162 965 Gene3D - 653 854 IPR027417 -
Lan18g1162 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 427 837 IPR027417 -
Lan18g1162 965 Pfam AAA domain 428 519 IPR041677 GO:0004386
Lan18g1162 965 Pfam AAA domain 545 616 IPR041677 GO:0004386
Lan18g1162 965 CDD DEXXQc_Helz-like 427 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1162 Lan-Chr18 16415307 16420741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1162 427 584 Core DNA Replication Machinery Family AT1G08840 31.677 9.50e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1162 K18422 - gmx:100801796 1383.62