Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1141 ATGGAAGAAGGAAGCACCATGCAAGAATGTTTCATGAACCCAACAACAACAACAACATATAATGGAGTTCGAAAGAGAAAATGGGGGAAATGGGTATCTGAAATCCGTGAACCTGGAAAGAAAAGTAGAATATGGTTAGGGAGTTATGAAGCACCAGAAATGGCAGCAGCAGCATATGATGTAGCAGCATTTCATCTCAAAGGACATGCAGCAAGACTCAACTTTCCAGAATTGATTCAAACATTGCCTAAGCCATCAACATCTAAACCTGTTGATGTGCAAATTGCAGCTCAAAAAGCAGCATTACAGTTCAAGAAACCTGCATTATTATCAGCTGATAATAATAATAATAGTAATAAAAGTAGTGTGGTTCCAATGAGAATGAGGTTATCATCCACACAAATTGAGGCCATAAATGAGTCTCCATTGGATTCACCAAAGATGTTTGATTATGAGTCTATGATGTATTGTAATAATCAAAATGTTCTTCAGCTCAGTGGTTGGGAAGAAATACAGTATGAGTCCTTATGGGATTTTTGA 540 0.3722 MEEGSTMQECFMNPTTTTTYNGVRKRKWGKWVSEIREPGKKSRIWLGSYEAPEMAAAAYDVAAFHLKGHAARLNFPELIQTLPKPSTSKPVDVQIAAQKAALQFKKPALLSADNNNNSNKSSVVPMRMRLSSTQIEAINESPLDSPKMFDYESMMYCNNQNVLQLSGWEEIQYESLWDF* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1141 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 177 - -
Lan18g1141 179 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Lan18g1141 179 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Lan18g1141 179 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Lan18g1141 179 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Lan18g1141 179 PRINTS Ethylene responsive element binding protein signature 58 78 IPR001471 GO:0003700|GO:0006355
Lan18g1141 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 15 177 - -
Lan18g1141 179 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Lan18g1141 179 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Lan18g1141 179 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1141 Lan-Chr18 16291967 16292642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1141 18 178 AP2-EREBP Transcription Factor Family AT1G71450 50.610 4.02e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan18g1141 AP2 1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1141 - - lang:109333165 351.288