Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1139 ATGGGATTCTGGGGGATTGAAGTGAAACCTGGAAAACCAATTCCTTATCATGCTGATAATGTGCAAGGAAAGCTTCACGTCACTCAGGCTACTCTAGGCACGGGTTCATCAGTGGAGAAAAGCATTCTTCAGTGCTCTTCTGGACACAAAAGTGCAGTTTTCTTATGTTCATTGCTGCCGAATAAGATTGAGTCATGCCCTTTGAATCTTGAGTTTGATGATGACGACTTAGTTGCATTCTCAGTGATTGGTCCACGAAGCATCCATCTTTCTGGTTATTTTGTGGCCGATGATGGGGATGACCTTAGGGATGACTATGAATATGATTCATTTGGTGAGGATGTGGAGGGAACTGAGACTGAGGAGTCTTCTGAATATGATTCTGAAGATGGATTTGACTTCATTGATGGTAGTGATGTTGACATATACCGATCTTCGTCTCTCCCAAATAGTGGAGTTGTAATTGAGGAAATAGTGGACGAAGATAAACCTGACGCCGGAGATGATCCAGCTAAGCAATCAAAGAAAAAGAAGCAGGCAGCTCGGTTGAAAGAGAAAGACAACAAAAGTTCTCAGCTTCCAATTGTTGTTGGGGATGAAACTGTCCCCCCGAATCTGGAAAGTGAACATGATGTTGAGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTGCATCACAGAAAAGTAAATTTGACAACCCAAAGGAAGAAGCTGAAACGAAAGAAGGACATGCACCTAAGAAAACTGACAAGACCAGTAAGAAGGGAAAACAGGTTGATCAATCTGCTGGTTTAAAACGAAAAGTTGAAAGTGCTGATGATGATGTGCAGCGTCAAGATGGGAAAAAGAAGAATAAAAAAGATAAGTTGAAAAAACATGGTGAAGGGGGAAGTGCTCATGTGGCTGGTAGTATTAATGAGGCTATTGTTACTACTCCAGATGAAAAGCATTCTGAGGAGGTTAGAACTACACTGAACACTAACAATGCTTCTGAGGCAAAGGATGGGCAGCAAGATGGAAATCTATCTAATAAGGAGCTCCTTGTTGAGAAGAAAAATAAGAAGAAAAAGAAGAAAAAGGCCAAAGAGTCTGAAGGAGATGCTACTGCAAATGAAATTGCTACCGCTGTTGAAAATAAAGATTTATCTACCTCGGAGAAAAAAGGGAAGAAAAATACTGAAGACATACCATCTCAAGTAAGATCCTTTCCGAATGGGTTGGTTATTGAGGAGCTATCTATGGGTAAACCAGATGGCAAACGGGCTACTCCTGGAAAGAAGGTCAGTGTTAAATACATTGGCAAGCTGAGAAAGGATGGGAAAATATTCGACTCAAACGTGGGAAGAGCACCGTTTAAATTCCGCCTTGGTGTAGGACAAGTCATCAAGGGGTGGGAAGTTGGGGTCAATGGGATGCGAATTGGTGATAAAAGAAGAATCACAGTTCCGCCATCTATGGGATATGGAGACAAACGTGCTGGGACTATACCACCAAATTCGTGGCTTGTATTTGATGTGGAGTTGGTTAATGTTGATGGCTGA 1542 0.417 MGFWGIEVKPGKPIPYHADNVQGKLHVTQATLGTGSSVEKSILQCSSGHKSAVFLCSLLPNKIESCPLNLEFDDDDLVAFSVIGPRSIHLSGYFVADDGDDLRDDYEYDSFGEDVEGTETEESSEYDSEDGFDFIDGSDVDIYRSSSLPNSGVVIEEIVDEDKPDAGDDPAKQSKKKKQAARLKEKDNKSSQLPIVVGDETVPPNLESEHDVEESEDEDGFPISASQKSKFDNPKEEAETKEGHAPKKTDKTSKKGKQVDQSAGLKRKVESADDDVQRQDGKKKNKKDKLKKHGEGGSAHVAGSINEAIVTTPDEKHSEEVRTTLNTNNASEAKDGQQDGNLSNKELLVEKKNKKKKKKKAKESEGDATANEIATAVENKDLSTSEKKGKKNTEDIPSQVRSFPNGLVIEELSMGKPDGKRATPGKKVSVKYIGKLRKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGVNGMRIGDKRRITVPPSMGYGDKRAGTIPPNSWLVFDVELVNVDG* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1139 513 MobiDBLite consensus disorder prediction 159 189 - -
Lan18g1139 513 Coils Coil 344 365 - -
Lan18g1139 513 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 425 512 IPR001179 GO:0003755
Lan18g1139 513 MobiDBLite consensus disorder prediction 230 283 - -
Lan18g1139 513 PANTHER PEPTIDYLPROLYL ISOMERASE 1 259 - -
Lan18g1139 513 PANTHER PEPTIDYLPROLYL ISOMERASE 277 511 - -
Lan18g1139 513 PIRSF FK506-bp_FPR3 1 54 IPR023566 GO:0003755
Lan18g1139 513 PIRSF FK506-bp_FPR3 302 512 IPR023566 GO:0003755
Lan18g1139 513 PIRSF FK506-bp_FPR3 46 194 IPR023566 GO:0003755
Lan18g1139 513 PIRSF FK506-bp_FPR3 197 302 IPR023566 GO:0003755
Lan18g1139 513 Gene3D Nucleoplasmin core domain 1 100 - -
Lan18g1139 513 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Lan18g1139 513 SUPERFAMILY FKBP-like 400 511 - -
Lan18g1139 513 MobiDBLite consensus disorder prediction 159 402 - -
Lan18g1139 513 MobiDBLite consensus disorder prediction 323 344 - -
Lan18g1139 513 MobiDBLite consensus disorder prediction 381 395 - -
Lan18g1139 513 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 277 511 - -
Lan18g1139 513 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 259 - -
Lan18g1139 513 Gene3D - 399 512 IPR046357 GO:0003755
Lan18g1139 513 MobiDBLite consensus disorder prediction 105 131 - -
Lan18g1139 513 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 420 509 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1139 Lan-Chr18 16280461 16285325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1139 421 510 Calmodulin-binding Proteins AT5G48570 35.052 6.12e-09 56.6