Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1134 ATGGGGTGCATATGCTCAAAAGAATCATCATCAGACAAAGATAAAGTTGATGAAAATGAGAAAGAAAATAATGAGTTGAAAAAGTCTACAGTACAATTGGTTGCTCCTAATGTCTCAACTGCAGAGTTAAATGGTGGTGGTGGTGGTAGCATGGAAGATGATGATGGGTCAGTGCCACATATGGCTAAGTCATATTCACAAATAATCAAGAGTTGTGTCCCAGCACTATCACTATTAGAAGATAAAAACAACAACAACATCAACAACCCTTTAGATGTTGTTGTAAAATCATCAACAAAAGGAAAAAATCAGCATCAGACATGTATAACATTAGGTGGTGGTGAAAGAAAGCCAATGATGAGTAGAATACTTAGTGTACCACATGGTCTTGGAGGACATATTGATAATGCATGGCCATCATGGTTATCTTCTGTTGCTGGAGAAGCCATCAAGGGATGGGTTCCTCGAAGAGCTGACTCTTTTGAAAAACTAGACCAAATTGGACAGGGTGCATATAGTAGTGTCCATAAAGCTCGTGACCTTGAAACAGGTAAAATTGTGGCTTTGAAGAAAATCAGATTTTCAAGTTCAGATCCTGAGAGTGTGCGTTTCATGGCAAGGGAAATATATATTTTGCGTCAACTTGACCATCCAAATGTTATAAAGCTTGAAGGTATTGTGACTTCAACAACTTCCACAAGTTTGTATCTTGTTTTTGAATATATGGAGCATGACCTTGCTGGACTAGCAGCACTACCTGGCATAAAGTTCACTGAACCACAGATAAAATGTTACATAAAACAACTGCTTTGTGGGCTTGAACACTGCCATCAACGCGGTGTGTTGCACCGTGACATCAAGGGTTCAAATCTTCTGATCGACAACAATGGAAACCTTCAGATTGGAGATTTCGGTCTTGCAACAGTTTATGATCCTGATAAAAAGCAGGCATTAACTAGTCGTGTTGTAACACTATGGTATAGGGCACCTGAGCTTTTGCTAGGTGCTACTGAATATGGTTCTGGAATTGATTTGTGGAGTGTTGGTTGCATTCTAGCAGAATTGCTGGTAGGGAAACCTATCATGCCCGGAAGAACTGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCTCCATCTGAAGAGTATTGGCAAAGAACAAAACTTCCCCATGCAACAAGTTTCAAACCACAACACAGTTACAAACGCAATCTCTTTGAAACATTTAAAAGTTTTCCTTCTTCAGCATTGGCTCTTGTTGATAAGCTCCTTGCAATAGAACCTGAAAATCGAGGATCTGCAACTTCTGCACTTAACAGTGAGTTCTTGACTACAAATCCCTTACCTTGTGATCCCTCGAGTTTACCCAAGTTTCCACCAAGCAAGGAACTTGATGCTAGGCGTCGAGACAAAGAAGAAATGAGGAAAAATAATGAAATAGTGAAAGGACGTGAACCACTATCTGTTTTAAGAGGAGCAGGAAATACCAAAGGAATGAGATCACCCGAAAGAAATATAATTATACAGGGTAAGTCACATAGTAGAAATTCCATTGTTAAAAATCAATCACATGAGGATGATGGGTCACACCATAAGAAGGATCCAACAAGAGTATCTATACAAAATGGTTATACACATTCTACTTCAATGATGCATGGAAGTGCAACAGGACAATCCTCAATGCATAAGTTAGAAGACATGTCTAGGAAGAACCCAGACTTAAGGACACAAAGTGAGAATCATGTAACAGATTTCTCTGCCTCTTCCATTAAAAGGGACCAAGGAGCCTCTGGCAGGGGGTATGTGGCCAAGAAAAATAGGATCCATTACTCAGGACCATTGGTGCCTCCAGGTGGAAACATTGATGACATGCTGAAAGAGCATGAGAGATTAATGCAAGAAGCTTTCAGGAGTGTCAAGAAGACCAATCATAAAAACTAG 1947 0.3975 MGCICSKESSSDKDKVDENEKENNELKKSTVQLVAPNVSTAELNGGGGGSMEDDDGSVPHMAKSYSQIIKSCVPALSLLEDKNNNNINNPLDVVVKSSTKGKNQHQTCITLGGGERKPMMSRILSVPHGLGGHIDNAWPSWLSSVAGEAIKGWVPRRADSFEKLDQIGQGAYSSVHKARDLETGKIVALKKIRFSSSDPESVRFMAREIYILRQLDHPNVIKLEGIVTSTTSTSLYLVFEYMEHDLAGLAALPGIKFTEPQIKCYIKQLLCGLEHCHQRGVLHRDIKGSNLLIDNNGNLQIGDFGLATVYDPDKKQALTSRVVTLWYRAPELLLGATEYGSGIDLWSVGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEEYWQRTKLPHATSFKPQHSYKRNLFETFKSFPSSALALVDKLLAIEPENRGSATSALNSEFLTTNPLPCDPSSLPKFPPSKELDARRRDKEEMRKNNEIVKGREPLSVLRGAGNTKGMRSPERNIIIQGKSHSRNSIVKNQSHEDDGSHHKKDPTRVSIQNGYTHSTSMMHGSATGQSSMHKLEDMSRKNPDLRTQSENHVTDFSASSIKRDQGASGRGYVAKKNRIHYSGPLVPPGGNIDDMLKEHERLMQEAFRSVKKTNHKN* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1134 648 Gene3D Phosphorylase Kinase; domain 1 156 248 - -
Lan18g1134 648 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 92 642 - -
Lan18g1134 648 Pfam Protein kinase domain 161 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1134 648 ProSiteProfiles Protein kinase domain profile. 161 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1134 648 SUPERFAMILY Protein kinase-like (PK-like) 154 453 IPR011009 -
Lan18g1134 648 SMART serkin_6 161 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1134 648 MobiDBLite consensus disorder prediction 463 481 - -
Lan18g1134 648 MobiDBLite consensus disorder prediction 1 58 - -
Lan18g1134 648 Coils Coil 627 647 - -
Lan18g1134 648 MobiDBLite consensus disorder prediction 447 481 - -
Lan18g1134 648 ProSitePatterns Protein kinases ATP-binding region signature. 167 190 IPR017441 GO:0005524
Lan18g1134 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Lan18g1134 648 MobiDBLite consensus disorder prediction 8 27 - -
Lan18g1134 648 CDD STKc_CDK9_like 161 444 - -
Lan18g1134 648 PANTHER CELL DIVISION PROTEIN KINASE 92 642 - -
Lan18g1134 648 MobiDBLite consensus disorder prediction 520 539 - -
Lan18g1134 648 MobiDBLite consensus disorder prediction 574 602 - -
Lan18g1134 648 Gene3D Transferase(Phosphotransferase) domain 1 249 485 - -
Lan18g1134 648 MobiDBLite consensus disorder prediction 580 595 - -
Lan18g1134 648 MobiDBLite consensus disorder prediction 510 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1134 Lan-Chr18 16250510 16255858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1134 153 484 Core Cell Cycle Gene Families AT5G10270 52.161 8.60e-120 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan18g1134 Pkinase 3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1134 K08819 - gmx:100791743 807.749