Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1128 ATGGGATCATCTTCAATCTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCTTCACCTCTACAATTCTTCTCTATGATGTCACTTTCACCTAGCATAGATTCACCTTACACATGGCTTAGAGAAATGAAATCCGAGGAAAGGGGTTTGTGTTTGATCCATTTGTTGCTCACTTGTGCTAACCATGTAGCTGCTGGTAGTCTTGAAAATGCAAACATCACACTTGAGCAAATTTCGCAGCTCGCCTCGCCTGATGGTGATACTATGCAGCGAATTGCTGCTTACTTTACAGAAGCACTCGCTGATCGGATGCTGAAAGCGTGGCCTGGCCTCCACAGGGCCCTCAATTCTACCAAGATGGTTATGGTTTCTGAAGAAATTATTGTCAAGAAGCTCTTCCTCGAGTTGTTTCCGTTCTTGAAGGTCGCATATATTTTGACGAATCAGGCTATTGTTGAAGCGATGGAAGGGGAGAAAATGGTACATATAGTTGATCTCAATGCCACTGAACCTATGCAGTGGATTGCTCTCCTCCAAGTCTTGAGTGCACGTCCCGAAGGCCCGCCCCATTTGAGAATTACTGGTGTTCATCAGCATAAAGAGATACTTGATCAGATGGCTCATAAACTTACCGAAGAAGCAGAAAAGTTGGATATCCCATTCCAATTCAATCCAGTAGTTAGCAAATTAGAAAACCTTGATTTCGATAAACTTCGTGTGAAAACTGGGGAGGCGCTAGCAATAAGTTCTTCTCTGCAATTACATTCCCTTCTGGCTTTGGATGATGAAGCCTTGCGAAGAAAATCGCCCCTCCTGTCAAAAAATTCACTGCAAAAGGCACTGATGGTTAATGGCTATAGCCCAAGCCCTGACTCAGCCTCATCATCACCGGTATCTTTACATGCTTCAATTAACTCGGAGAGCTTTCTTAATGCCTTATGGGGATTGTCACCAAAGGTCATGGTTGTAACAGAACAAGACTTCAACCATAATAGTTCGACGCTGATGGAAAGGCTGCTAGAATCGCTATATTCTTATGCAGCATTGTTTGATTGCTTGGAGTCAACAATCTCAAGAGCGTCGTTGGAGAGATTCAAGGTGGAGAAGATGCTTTTCGGCGAGGAAATCAAGAACATTATTGCTTGTGAAGGGGCTGAAAGAAAGGAAAGACATGAGAAGCTGGATAAATGGTTCCAAAGACTTGATTCGTCCGGATTCGGCAACATGCCTTTAAGCTATTTTGGCATGTTGCAGGCAAGGAGGTTCCTACAGACCTATGGCTGTGAGGGATATAGGATGAAGGAGGAAAATGGTTGTGTAGTAATTTGCTGGCAGGACCGGTCCTTGTTTTCGATATCGGCATGGAGATCTAGAAAGTAA 1380 0.4362 MGSSSIFQEEGSSSVTSSSPLQFFSMMSLSPSIDSPYTWLREMKSEERGLCLIHLLLTCANHVAAGSLENANITLEQISQLASPDGDTMQRIAAYFTEALADRMLKAWPGLHRALNSTKMVMVSEEIIVKKLFLELFPFLKVAYILTNQAIVEAMEGEKMVHIVDLNATEPMQWIALLQVLSARPEGPPHLRITGVHQHKEILDQMAHKLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSSLQLHSLLALDDEALRRKSPLLSKNSLQKALMVNGYSPSPDSASSSPVSLHASINSESFLNALWGLSPKVMVVTEQDFNHNSSTLMERLLESLYSYAALFDCLESTISRASLERFKVEKMLFGEEIKNIIACEGAERKERHEKLDKWFQRLDSSGFGNMPLSYFGMLQARRFLQTYGCEGYRMKEENGCVVICWQDRSLFSISAWRSRK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1128 459 ProSiteProfiles GRAS family profile. 43 456 IPR005202 -
Lan18g1128 459 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 458 IPR005202 -
Lan18g1128 459 PANTHER SCARECROW-LIKE PROTEIN 3 7 458 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lan18g1128 459 Pfam GRAS domain family 52 456 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1128 Lan-Chr18 16223914 16226039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1128 5 459 GRAS Transcription Factor Family AT1G50420 65.560 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan18g1128 GRAS 1.7e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1128 - - tcc:18589932 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0096 17 540439 542700 Lan18g1128 18 16223914 16226039 LSH