Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1122 ATGGCAACTTTTGTGGAAGAGGGAACTAACTCAAACTCTATTCAAAACCAATCCAAGATGGAGAATAACACTACCACTAACATCATCATAACCAAATCCATTCACCATAATTATCCAAATAATATTAATAATAATATTAAGAAGAGAAAGATACCTTCTTCTTCTGAATCACTTGTTGATGTGATTCCCACACTCCTTTCTCAATCACACGGTTTCATCTCCGTCATAGGGCGCCGGCGGTTAATGGAAGACGCCGTCAAGGTTGTTCCTCATTTCATGCTGTACGGTGGTTGCTACTACGATTTCTTTGCGGTTTATGACGGTCACGGTGGAACGTTGGTGGCGGAGGCATGCCGTGAGAGGTTACACTTGCTATTGGCGGAGGAAGTGAAAATGGAGAAGGAGGAGTTGTTGAATTGGGATAAGGTTATGGGTTCGTGTTTCTTTAAGATGGATATGGAAATTGGCGTTGGTGATGAGGATGGTAAGGGAGGGAATACTATGGGTTCCACGGCGGCGGTGGTGGTGGTTGGGAAGGAGGAGATTGTGGTGGCGAATTGTGGTGACTCGAGAGCTGTGTTATCTCGTGGCGGTGTAGCTGTGCCACTTTCACGTGATCATAAGCCTGATAGACCAGATGAAAAGCAGAGGATTGAAGATGCTGGTGGAGTAGTCATTGATTGGAATGGGAATCGTGTTTTAGGTGTACTTGCCACTTCCAGATCCATAGGGGACCACTGCATGAAGCCTTTTGTGATATCAGAACCTGAGATAAATGTGTATGAAAGAACAGAGTTAGATGAGTTTGTTGTGGTAGCAAGTGATGGCCTATGGGATGTGGTATCTAACAAATGTGCTTGTGAAGTTGTAAGAAGTAACATAAATGCACATATGAAGAAGAAGAAGAAGAAGAATGAAAAAGAAGAGTGTATTACAAGTTATGCAGCAGAGTCAGCAGCATTGCTAGCTGAGTTGGCTATGGCTCGTGGAAGCCAAGACAACATTAGTGTCATAGTCATCCAACTCAATACTATCATTTTACCCAAATAG 1050 0.4324 MATFVEEGTNSNSIQNQSKMENNTTTNIIITKSIHHNYPNNINNNIKKRKIPSSSESLVDVIPTLLSQSHGFISVIGRRRLMEDAVKVVPHFMLYGGCYYDFFAVYDGHGGTLVAEACRERLHLLLAEEVKMEKEELLNWDKVMGSCFFKMDMEIGVGDEDGKGGNTMGSTAAVVVVGKEEIVVANCGDSRAVLSRGGVAVPLSRDHKPDRPDEKQRIEDAGGVVIDWNGNRVLGVLATSRSIGDHCMKPFVISEPEINVYERTELDEFVVVASDGLWDVVSNKCACEVVRSNINAHMKKKKKKNEKEECITSYAAESAALLAELAMARGSQDNISVIVIQLNTIILPK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1122 349 CDD PP2Cc 68 342 IPR001932 -
Lan18g1122 349 PANTHER ALPHABET, ISOFORM E-RELATED 32 344 - -
Lan18g1122 349 Gene3D - 64 345 IPR036457 -
Lan18g1122 349 MobiDBLite consensus disorder prediction 1 20 - -
Lan18g1122 349 SUPERFAMILY PP2C-like 62 343 IPR036457 -
Lan18g1122 349 Pfam Protein phosphatase 2C 71 335 IPR001932 -
Lan18g1122 349 ProSitePatterns PPM-type phosphatase domain signature. 102 110 IPR000222 GO:0043169
Lan18g1122 349 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 32 344 - -
Lan18g1122 349 ProSiteProfiles PPM-type phosphatase domain profile. 69 342 IPR001932 -
Lan18g1122 349 SMART PP2C_4 59 340 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1122 Lan-Chr18 16189138 16191832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1122 54 342 PP2C-type Phosphatase Gene Family AT1G07430 45.562 2.58e-83 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1122 K14497 - gmx:100785905 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1122 18 16189138 16191832 Lan18g1122 18 16189138 16191832 ECH