Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1114 ATGATCATTTCCGAGAAGAATCGTAAGGAGATCTCCAAATACCTCTTTCAAGAGGGAGTTTTGTATGCAAAGAAGGACTTCAATTTGGCAAAGCACCCAGAGATAGATGTGCCAAATCTGCAGGTGATTAAGTTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTACTGGTTCCTCACCAATGACGGCATTGAGTTCCTTAGGACTTACCTTAATCTCCCTTCGGAGATTGTCCCTGCCACTCTTAAGAAGCAGGCCAAGCCAGCTGGCAGACCCTTTGGTGGCCCACCTGGTGATCGCCCTCGTGGCCCACCACGCTTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGATACCGTGGGGGTCCCCGAGGACCTGCTGGTGAATTTGGTGGAGAGAAGGGTGGAGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTCCTCCTGGTGGAAGGTCTGGGTTCGGTCGTGGTGCCGGTGGCTATGGAGCACCACCTCCTTCAAATGCTTAA 543 0.512 MIISEKNRKEISKYLFQEGVLYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPAGEFGGEKGGAPADYRPSFGGPPGGRSGFGRGAGGYGAPPPSNA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1114 180 PANTHER 40S RIBOSOMAL PROTEIN S10 1 173 IPR037447 -
Lan18g1114 180 MobiDBLite consensus disorder prediction 91 180 - -
Lan18g1114 180 Gene3D - 1 104 IPR036388 -
Lan18g1114 180 Pfam Plectin/S10 domain 3 94 IPR005326 -
Lan18g1114 180 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 173 - -
Lan18g1114 180 MobiDBLite consensus disorder prediction 112 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1114 Lan-Chr18 16147456 16149284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1114 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.935 7.36e-74 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1114 K02947 - csv:101212088 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1114 18 16147456 16149284 Lan18g1114 18 16147456 16149284 ECH
Lan17g0120 17 698361 703400 Lan18g1114 18 16147456 16149284 LSH
Lan18g1114 18 16147456 16149284 Lan6g0094 6 628245 630263 LSH