Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1112 ATGGGAGGTTGCTGTTGTTGTTCATCGAAGGAGACTCAATTGAACGCTCAACCTCGTTCTCAATACTACTACTACCCAAGATTATCAGAGGAGCATGTCCCACTATCATCTCACCACAATGCTGCATCTGGTTTTTCTGGAGGGCTCTTAGTTGATACTAATCTAGACACTTCAAGTCCTGATACTTATAGACCGCCTCCTGCTCCTATCCCTTTCAATGTTACTTTAGGTGTCACTCAAACACCACCTGTGGCTCAAGAAATTTGTGTTGATAAGACTGATATATCCCTGCATCCTGCAAATTCTGATTCAAATCAAGAAACAGTTCCTGAGGACAATCATGAGGCCTCAGCTAAGCCCGACGAGCTGAAGGAATCAGAGTGCAAAGTTCATTCTGCTTTAGAACTTGACTCAGCAAAGGATTCTGGAGTTGAACTTCCAAAGTTGGCAGAACCTATCAGTTTTGTGGAAGAAGAGGATACGTGCCCAATTTGTTTAGAAGAGTATGATGCAGAGAATCCAAAACTCCTCACAAAATGTGACCATCATTTTCACCTGGCATGCATTCTTGAATGGATGGAAAGAAGTGAAACTTGTCCGGTGTGTGATCAGGATATGGTTTTAGACCTTCCATTAGATTGA 642 0.4252 MGGCCCCSSKETQLNAQPRSQYYYYPRLSEEHVPLSSHHNAASGFSGGLLVDTNLDTSSPDTYRPPPAPIPFNVTLGVTQTPPVAQEICVDKTDISLHPANSDSNQETVPEDNHEASAKPDELKESECKVHSALELDSAKDSGVELPKLAEPISFVEEEDTCPICLEEYDAENPKLLTKCDHHFHLACILEWMERSETCPVCDQDMVLDLPLD* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1112 213 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 212 - -
Lan18g1112 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 208 IPR013083 -
Lan18g1112 213 MobiDBLite consensus disorder prediction 96 127 - -
Lan18g1112 213 SMART ring_2 162 202 IPR001841 -
Lan18g1112 213 Pfam Ring finger domain 160 202 IPR001841 -
Lan18g1112 213 MobiDBLite consensus disorder prediction 108 127 - -
Lan18g1112 213 SUPERFAMILY RING/U-box 156 209 - -
Lan18g1112 213 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 212 - -
Lan18g1112 213 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1112 Lan-Chr18 16133772 16136785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1112 1 213 C3H Transcription Factor Family AT5G41350 52.752 4.85e-71 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1112 - - gmx:100816369 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1112 18 16133772 16136785 Lan18g1112 18 16133772 16136785 ECH