Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1110 ATGAATTATAGGATTGAGATGAGTTACAACTTGTTTAAGTTCTTAGCACGCTGTTGGGGTGCAGGGCAAAAATTTCCAGTTACCAAGGACCAAGTTAATGATATTGAAAATGAAGATAAAGGTGGCTCCAATGACTTGCCGCAATTCCGTGAATATACCTTTGATGAACTTTGGAAGGCCACCTCTGGTTTTGCAGTAGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGGAAACTTGCTAATCAAGTGCAAATTGCTGTTAAGCGGTTTAATAGTTCTGCTTGGCCGGATGCTAGGCAATTTCTGGAAGAAGCCAGGGCTGTTGGTCACTTAAGGAACCGGAGATTGACAAATCTGCTTGGATGTTGCTGTGAAGGTGATGAGAGGCTACTCGTTGCAGAATATATGCCCAATGATACTTTGGCAAAGCACTTATTCCATTGGAAAGCTCAGCCCATGAAATGGGCAATGCGACTGAGAGTTGCTTTACACCTCGCCCAAGCTCTAGAATACTGTACCAGCAAAGGACGTGCTATATATCACGATCTGAATGCTTACAGAGTTGTTTTTGATAATGAAGGCAATCCTAGGCTTTCATGCTTCGGTCTGATGAAAAACAGTCGAAACGGGAAAAGTTACAGCACAAATCTGGCATTTACTCCACCTGAGTATCTCAGGACAGGTAAAGTTTCTCCAGAAAGTGTAACTTATAGCTTTGGGACGCTTTTGCTTGACCTTGTCAGTGGGAAACATATTCCTCCAAGCCGTGCACTTGAGTTGATTAGGGACAGGAATCTTCAGGTGCTAACAGATTCTAGTTTAGAAGGTCAATTTTCTAATGATGAAGGGACTGAATTACTGCGTCTGGCCTCACGATGCTTACAATTTGAACCGCAAGAACGTCCTAATCCTAAGTTATTGGTCACTGCTTTAACACATCTACAAAAGGATTCCCAGGTTCCTTCTTATGTGCTGATGGGTATACCACATGATGTTGCTGCTTTGTCTCTTTCTCCGCTTGCCGAAGCTTGTCTACGAATGGATTTGTCTGTTATACATGAGATGATGGAGAAGATTGGGTATAGAGATGATGAGGGTACTGCAACTGAGCTTTCATTCCAAATGTGGACTAACCAGATGAAGGAGTCATTGAGCTCAAAGATGAAGGGCGATTCTGCTTTTCGGCATAAGGACTTTAAAACAGCAATTGAAAGCTACACAGTGTTCATTGATGTTGGAACCACGATTTCTCCGACAGTTTTTGCGCGTCGAAGTCTATGTTATCTGATGATGGATATGGCAGAGGAAGCACTTAATGATGCATTACAGGCACAAGTTATATTCATTTTTTCCTACATTGCATCCTATTTACAAGCTGTGGCTCTTATTGCACTGGGCAAGGAGAATGAGGCACAAGTAGCACTCATAGAGGGTTTTGCACTTGAAAAAAAGACCAACAACACAAAGTAG 1491 0.4205 MNYRIEMSYNLFKFLARCWGAGQKFPVTKDQVNDIENEDKGGSNDLPQFREYTFDELWKATSGFAVENIVSEHGEKAPNVVYKGKLANQVQIAVKRFNSSAWPDARQFLEEARAVGHLRNRRLTNLLGCCCEGDERLLVAEYMPNDTLAKHLFHWKAQPMKWAMRLRVALHLAQALEYCTSKGRAIYHDLNAYRVVFDNEGNPRLSCFGLMKNSRNGKSYSTNLAFTPPEYLRTGKVSPESVTYSFGTLLLDLVSGKHIPPSRALELIRDRNLQVLTDSSLEGQFSNDEGTELLRLASRCLQFEPQERPNPKLLVTALTHLQKDSQVPSYVLMGIPHDVAALSLSPLAEACLRMDLSVIHEMMEKIGYRDDEGTATELSFQMWTNQMKESLSSKMKGDSAFRHKDFKTAIESYTVFIDVGTTISPTVFARRSLCYLMMDMAEEALNDALQAQVIFIFSYIASYLQAVALIALGKENEAQVALIEGFALEKKTNNTK* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1110 496 Pfam Protein tyrosine and serine/threonine kinase 80 316 IPR001245 GO:0004672|GO:0006468
Lan18g1110 496 Gene3D Phosphorylase Kinase; domain 1 38 142 - -
Lan18g1110 496 Gene3D Transferase(Phosphotransferase) domain 1 144 335 - -
Lan18g1110 496 ProSiteProfiles Protein kinase domain profile. 67 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1110 496 SUPERFAMILY TPR-like 393 489 IPR011990 GO:0005515
Lan18g1110 496 PANTHER TPR DOMAIN KINASE 7 493 - -
Lan18g1110 496 SUPERFAMILY Protein kinase-like (PK-like) 45 328 IPR011009 -
Lan18g1110 496 Gene3D Tetratricopeptide repeat domain 377 489 IPR011990 GO:0005515
Lan18g1110 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 7 493 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1110 Lan-Chr18 16121897 16126832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1110 26 349 Glycoside Hydrolase AT3G07070 32.865 3.96e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan18g1110 PK_Tyr_Ser-Thr 1.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1110 K14500 - jre:109014463 756.903