Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1103 ATGACTCAATCTATTCCATGGAAAACTTTGAATTTCCTACAGGTTGTTGGAGTGGTTGGCTTTATGGATAGAAGGTTGGACATGCCTGAAGGGCTTGATCCTGATGCAGCATCAATCATCCAAGAATGTTGGAGAAGTGATTCAGATAAACGCCCATCATTTCAAGAGCTAATACAGAGAATGATGTTCCTTCTCAACAAAGTAACAGCAGGATCAATTAGGAGAATTTGA 231 0.3983 MTQSIPWKTLNFLQVVGVVGFMDRRLDMPEGLDPDAASIIQECWRSDSDKRPSFQELIQRMMFLLNKVTAGSIRRI* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1103 76 Gene3D Transferase(Phosphotransferase) domain 1 1 72 - -
Lan18g1103 76 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 67 - -
Lan18g1103 76 Pfam Protein tyrosine and serine/threonine kinase 6 60 IPR001245 GO:0004672|GO:0006468
Lan18g1103 76 PANTHER - 1 67 - -
Lan18g1103 76 SUPERFAMILY Protein kinase-like (PK-like) 3 64 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1103 Lan-Chr18 16083943 16084674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1103 1 72 MAP Kinase Kinase Kinase AT4G23050 63.889 1.95e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan18g1103 PK_Tyr_Ser-Thr 3e-06 CL0016