Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1101 ATGGGTGTGGAAGATAGAGAAGAACGTGTTTATGAAGCTTTGTTGGATCGATGTAGAAGCATGGAGAAGAGTCAAGCTAAGCTGAGGGAACAGTTTCATGAATTGTTACAGAACAAGAGAGATGAAGATACACATAAAAATCTCCTTTCATGTTTCTTCTTCTCAACAAGCATATATGAAAGTATCATGAAATGCATGGGCCATGCTCTTCATATCTATAAACCTTCATCTAGAGAGATCATATATTGGAATCATACAGCAGAAAATCTGTATGGATGGAAGGACTACGAAATCATTGGACAAAGATTTGATGAGTTCTTAATTAGTGAAGAGTATTATGCATCTCTACAAAAGATTATGGAAAGGTTGATGAGAGGAGTACCATGGTCTGGGCAATTTCCATTGAAGAAAAGATCTGGTGAAGTATTTATGGCAATGGTAACTAAAACTCCTCTTTATGAGGATGGTGAACTTGTTGGTGTTATCACTGTTTCAAGTGATGCAGCAGTGTTTAACTTCATACATTCAGAAAACTTAAGAACTTGTCAATTTGGTGTATATGGTCAACCTGAAGTACAGAGGTTAAACTCGAAAAGGATCCAGTGGCCGCCGCGCCCGTTGATTGCATCATCTGTTTCCAATCTGGCATCAAAGATTCTCCAACGCCGACATGCCGATGACACAATTTCTAGGAATACTTCAGCAGATGCAGATGATGAAAAACTAGAGCAGTGTAGCATATATGAAACAAAATACGACTCCAGACATCACCATAGTGAAAACACAACTTCTAGGGAGGCCTCTGAAAAGGACGAGTCCACCGCTGAATTTGGACGACCTTCTAAAATCGCTGCAAGATTCCTTGCAAAACTTCAAATCGGAGGAAGCCGAAAACTTAGGAAGGATAATGGAAGTATTAAAAGTAATTGCACAAATGAAAATTCAGGCAGCAGTGAAGTCAATAATGACCATGATTTATCTGGAGATTTTTTGGCATTTACTCCGCAACGGTGTGTTGCTAATGGAGAGAATAAAGAAGTAAATCTCCATAAACTTAATTCTTTATTTGATATGAAGAAAGCAGATACAAAAGTTTGTGCACATAAAACTTCTAGTGTTTTCAAAGATAGTTCTGTTAAACGTTTCTCGATGGAGCGAGATGGAAGCCTTGGTTCTCCTATTTCCCAGGACCCGTTGTTAAGATTCCACTGCCAATTTGATTATCCAAAGAGCTTGGAACCAGAAGCTACAAGTAAGGTGATAGAAGATGTAGTGCAAAAGCAGCAAGAAGGGTTGCAATTGCCTAGTTCGGGGGAGAGCACGGGCAGTCATGAAAGTTCATCAAGCAAATGGGATGAGTCTAATACTGTACGGTGTGAAATCCGTTGGGAAGATCTTGAATTAAGAGAGGAGATTGGACAAGGTTCTTATGCTGTTGTTCATCATGGAATATGGAATGGATCGGATGTTGCTGTCAAGGTTTACTTCGGGAATGGATACGCACAAGAGACTTTGCAAGACTACCGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAGTATACTCACCTGAAAGGCTTGCCATCATGACCGAGTTATTGCCTCGGGGAAGCCTTTTCAAAATTCTTCACAACAACAATCAGACATTAGACATCAGAAGGCGTTTAAGGATGGCCCTCGATGTTGCTAGAGGTATGAATTATCTTCATCACCGAAATCCACCAATTGTTCATAGAGACCTAAAGTCGTCTAATCTGCTTGTTGATAAAAACTGGACTGTCAAGGTTGGAGATTTTGGCCTGTCAAAATTGAAGAATGCAACTTTATTGACTACAAAATCTGGAAGAGGCACTCCTCAGTGGATGGCCCCGGAAGTCCTTCGAAATGAGCCGTCCAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCAATCTATTCCATGGAAAACTTTGAATTTCCTACAGGTTGTTGGAGTGGTTGGCTTTATGGATAGAAGGTTGGACATGCCTGAAGGGCTTGATCCTGATGCAGCATCAATCATCCAAGAATGTTGGAGAAGTGATTCAGATAAACGCCCATCATTTCAAGAGCTAATACAGAGAATGATGTTCCTTCTCAACAAAGTAACAGCAGGATCAATTAGGAGAATTTGA 2202 0.4015 MGVEDREERVYEALLDRCRSMEKSQAKLREQFHELLQNKRDEDTHKNLLSCFFFSTSIYESIMKCMGHALHIYKPSSREIIYWNHTAENLYGWKDYEIIGQRFDEFLISEEYYASLQKIMERLMRGVPWSGQFPLKKRSGEVFMAMVTKTPLYEDGELVGVITVSSDAAVFNFIHSENLRTCQFGVYGQPEVQRLNSKRIQWPPRPLIASSVSNLASKILQRRHADDTISRNTSADADDEKLEQCSIYETKYDSRHHHSENTTSREASEKDESTAEFGRPSKIAARFLAKLQIGGSRKLRKDNGSIKSNCTNENSGSSEVNNDHDLSGDFLAFTPQRCVANGENKEVNLHKLNSLFDMKKADTKVCAHKTSSVFKDSSVKRFSMERDGSLGSPISQDPLLRFHCQFDYPKSLEPEATSKVIEDVVQKQQEGLQLPSSGESTGSHESSSSKWDESNTVRCEIRWEDLELREEIGQGSYAVVHHGIWNGSDVAVKVYFGNGYAQETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIMTELLPRGSLFKILHNNNQTLDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSKLKNATLLTTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTQSIPWKTLNFLQVVGVVGFMDRRLDMPEGLDPDAASIIQECWRSDSDKRPSFQELIQRMMFLLNKVTAGSIRRI* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1101 733 CDD STKc_MAP3K-like 472 718 - -
Lan18g1101 733 MobiDBLite consensus disorder prediction 305 321 - -
Lan18g1101 733 CDD PAS 79 167 IPR000014 -
Lan18g1101 733 TIGRFAM sensory_box: PAS domain S-box protein 73 167 IPR000014 -
Lan18g1101 733 Coils Coil 11 31 - -
Lan18g1101 733 SUPERFAMILY PYP-like sensor domain (PAS domain) 77 167 IPR035965 -
Lan18g1101 733 PRINTS Tyrosine kinase catalytic domain signature 540 553 IPR001245 GO:0004672|GO:0006468
Lan18g1101 733 PRINTS Tyrosine kinase catalytic domain signature 579 597 IPR001245 GO:0004672|GO:0006468
Lan18g1101 733 PRINTS Tyrosine kinase catalytic domain signature 626 636 IPR001245 GO:0004672|GO:0006468
Lan18g1101 733 PRINTS Tyrosine kinase catalytic domain signature 645 667 IPR001245 GO:0004672|GO:0006468
Lan18g1101 733 PRINTS Tyrosine kinase catalytic domain signature 689 711 IPR001245 GO:0004672|GO:0006468
Lan18g1101 733 SUPERFAMILY Protein kinase-like (PK-like) 444 718 IPR011009 -
Lan18g1101 733 SMART serkin_6 466 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1101 733 Pfam PAS domain 77 167 IPR000014 -
Lan18g1101 733 MobiDBLite consensus disorder prediction 249 277 - -
Lan18g1101 733 Pfam Protein tyrosine and serine/threonine kinase 466 717 IPR001245 GO:0004672|GO:0006468
Lan18g1101 733 Gene3D PAS domain 75 170 - -
Lan18g1101 733 ProSiteProfiles PAS repeat profile. 80 127 IPR000014 -
Lan18g1101 733 ProSitePatterns Protein kinases ATP-binding region signature. 472 493 IPR017441 GO:0005524
Lan18g1101 733 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 42 719 - -
Lan18g1101 733 MobiDBLite consensus disorder prediction 429 452 - -
Lan18g1101 733 Gene3D Phosphorylase Kinase; domain 1 459 543 - -
Lan18g1101 733 PANTHER SERINE-THREONINE PROTEIN KINASE 42 719 - -
Lan18g1101 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Lan18g1101 733 Gene3D Transferase(Phosphotransferase) domain 1 545 728 - -
Lan18g1101 733 MobiDBLite consensus disorder prediction 298 321 - -
Lan18g1101 733 ProSiteProfiles Protein kinase domain profile. 466 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1101 Lan-Chr18 16075714 16081309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1101 1 729 MAP Kinase Kinase Kinase AT4G23050 44.180 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lan18g1101 PK_Tyr_Ser-Thr 2.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1101 - - gmx:100813707 1040.41