Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1095 ATGGGTATTTCCAACGACATCAATTCTAACTCAATCAATCCCACAACTTTTCAAGATAATATGTGCACCAGAAAGGTTGGGCAGAATAATAGAAGAGCCTTAGGTATCATTAATCAGAATATGACAGTGGAAGGTCGATACCCTTGTGTCGTTAACAAGAGGGCTTTATCAGAAAAGCAAGAGATTGGTGAGAAGAAACAAGCAGATCCAGTTCATAGACCAATCACCAGGAGGTTTGCTGCACAAATTGCTAGCACAAAGCAATCTGGTGTTGAGGAGACCAAGAAATCAAACTTGGGAGTTTCAAATTCGAACGAATTCGGACAGTTTATTTTTATTGACGATGATGACAATGACGACGAGCCGAAGTCAACAGAAGACCAGCCTGTGCCCATGTCTCCAGAGCAAACAGAAGCAATGCATGGTGAACCAGATCAGATGGAGGAAGTTGAGATGGAGGATATATATGAAGAGCTTCATTTGGACATTGATAGCAGTGATGCAAATAACCCTCTTGCAGTTGTGGATTATATTGAAGATCTTTATGTACACTACAGAAAAATTGAGAGTGGTGGTTGTGTCTCACCTAATTATATGGCAAAACAATGTGACATTAATGAAAAGATGAGGGCTATACTGATTGACTGGCTTATTGAGGTGCACGACAAATTCGACCTCTTGCCGGAGACATTGTTTCTCACGGTTAATCTCATAGATAGGTTTTTGGAAAAGCAGACAGTGGTAAGAAAGAAGCTTCAATTGGTTGGCTTGGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTGGTTGGAGATCTCATACTCATATCAGACAAGGCATATTCAAGGAAAGAAGTTCTAGAGATGCTTGAGCTACTAGCTTTCTTCTTGGTAGAGTTGTCTCTAGTTGAATATGAGATGTTGAAGTTTCCACCATCTATGCTAGCTGCAGCTGCAGTCTATACAGCTCAATGCACTGTCTATTGTGTCAAACAATGGAGTAAGACATGTGAATGGCATACCAACTATTCAGAAGATCAGTTGTTAGAGTGCTCTAGTTTAATGGTTGATTTCCACAAAAAAGCTGGGTCAGGGAAACTAACAGGGGTACATAGAAAGTATTGCTCATCTAAGTTCAGCTATACTGCAAAAAATGCACCAGCAAGTTTTCTTCTGGAGAACAACCCATTGTAG 1206 0.4063 MGISNDINSNSINPTTFQDNMCTRKVGQNNRRALGIINQNMTVEGRYPCVVNKRALSEKQEIGEKKQADPVHRPITRRFAAQIASTKQSGVEETKKSNLGVSNSNEFGQFIFIDDDDNDDEPKSTEDQPVPMSPEQTEAMHGEPDQMEEVEMEDIYEELHLDIDSSDANNPLAVVDYIEDLYVHYRKIESGGCVSPNYMAKQCDINEKMRAILIDWLIEVHDKFDLLPETLFLTVNLIDRFLEKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYSRKEVLEMLELLAFFLVELSLVEYEMLKFPPSMLAAAAVYTAQCTVYCVKQWSKTCEWHTNYSEDQLLECSSLMVDFHKKAGSGKLTGVHRKYCSSKFSYTAKNAPASFLLENNPL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1095 401 PIRSF Cyclin_A_B_D_E 3 296 IPR039361 -
Lan18g1095 401 PIRSF Cyclin_A_B_D_E 292 400 IPR039361 -
Lan18g1095 401 MobiDBLite consensus disorder prediction 112 143 - -
Lan18g1095 401 SUPERFAMILY Cyclin-like 169 294 IPR036915 -
Lan18g1095 401 PANTHER CYCLIN-B2-1 21 293 - -
Lan18g1095 401 PANTHER CYCLIN-B2-1 294 395 - -
Lan18g1095 401 Gene3D - 194 301 - -
Lan18g1095 401 Pfam Cyclin, N-terminal domain 184 296 IPR006671 -
Lan18g1095 401 ProSitePatterns Cyclins signature. 210 241 IPR006671 -
Lan18g1095 401 MobiDBLite consensus disorder prediction 83 102 - -
Lan18g1095 401 PANTHER CYCLINS 21 293 IPR039361 -
Lan18g1095 401 PANTHER CYCLINS 294 395 IPR039361 -
Lan18g1095 401 SMART Cyclin_C_2 269 392 IPR004367 -
Lan18g1095 401 CDD CYCLIN 209 297 IPR013763 -
Lan18g1095 401 SMART cyclin_7 215 299 IPR013763 -
Lan18g1095 401 SMART cyclin_7 300 361 IPR013763 -
Lan18g1095 401 SUPERFAMILY Cyclin-like 293 394 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1095 Lan-Chr18 16019738 16023042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1095 7 396 Core Cell Cycle Gene Families AT1G20610 51.991 2.79e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1095 K21777 - gmx:100798068 569.311