Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1081 ATGGCCAAACATGTTATTAACAAAGAATATCTGAAGGAAATTGACAAAGCACGTCGTGATCTAAGAGCTCTTATTTCCACCACAAACTGCGCTCCTCTCATGCTTCGATTAGCGTGGCACGATGCTGGTACTTATGATGCTAAAACAAGAACAGGAGGTCCCAATGGTTCTATCAGGAACGTACAAGAATTGAATCACAGTGCTAATAAGGGCTTGCATAAAGCAGTTCAATTATGTGAAGAAGTAAAGACCAAACATCCAATACTTTCATATGCTGACATTTACCAGCTAGCTGGTGTTGTTGCTGTAGAGGTCACTGGGGGTCCAACAATTGACTTTATTCCAGGAAGAAAGGATTTACTGGAATCTCCACCAGAAGGACGACTTCCAGATGCTAAACAAGGTGCATCACATTTAAGGGAAATCTTTTATCGCATGGGTCTAACTGATAAAGACATTGTGGCTTTGTCTGGAGGCCACACACTGGCTCATCTAGAGCGCTCAGGCTATGATGGTCAGTGGACAAGAGAACATTTGAAGTTTGATAACTCATATTTTGTGGAACTACTGAAAGCTGATTCTAAAGACTTATTGAAGCTTCCCACAGACATGGCTTTAGTCGAAGATCCTAAGTTCCGCAAGTATGTTGAGCTGTATGCAACGGATGAAGATGCTTTTTTGGAAGATTATGCAGCCTCACATAAGAAACTCTCAGAGCTAGGTTTAACTTCCAAGCATGTTGCAGAAAATGGTCCTACATTGGCCCAGGGAGCTATAGCAGTTGTTATTGCCATAACTGTTGTGATCCTGGGATACCTAATTGAAGTGAACAGAAAAACAAAGTGA 846 0.4161 MAKHVINKEYLKEIDKARRDLRALISTTNCAPLMLRLAWHDAGTYDAKTRTGGPNGSIRNVQELNHSANKGLHKAVQLCEEVKTKHPILSYADIYQLAGVVAVEVTGGPTIDFIPGRKDLLESPPEGRLPDAKQGASHLREIFYRMGLTDKDIVALSGGHTLAHLERSGYDGQWTREHLKFDNSYFVELLKADSKDLLKLPTDMALVEDPKFRKYVELYATDEDAFLEDYAASHKKLSELGLTSKHVAENGPTLAQGAIAVVIAITVVILGYLIEVNRKTK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1081 281 Pfam Peroxidase 18 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 CDD ascorbate_peroxidase 2 243 - -
Lan18g1081 281 ProSitePatterns Peroxidases active site signature. 31 42 IPR019794 GO:0004601
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 31 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 49 59 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 63 87 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 88 106 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 107 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 128 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 166 190 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Plant ascorbate peroxidase signature 218 242 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 Gene3D - 17 241 - -
Lan18g1081 281 Coils Coil 7 27 - -
Lan18g1081 281 SUPERFAMILY Heme-dependent peroxidases 11 244 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Haem peroxidase superfamily signature 31 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Haem peroxidase superfamily signature 152 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 3 276 IPR044831 GO:0004601|GO:0034599
Lan18g1081 281 Gene3D Peroxidase, domain 2 130 234 - -
Lan18g1081 281 ProSiteProfiles Plant heme peroxidase family profile. 31 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan18g1081 281 PANTHER L-ASCORBATE PEROXIDASE 5, PEROXISOMAL 3 276 - -
Lan18g1081 281 ProSitePatterns Peroxidases proximal heme-ligand signature. 152 162 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1081 Lan-Chr18 15924033 15926326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1081 88 249 Peroxidase AT4G17690 31.658 9.91e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1081 K00434 - gmx:100806101 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1081 18 15924033 15926326 Lan6g0206 6 1563845 1566758 LSH