Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1076 ATGGGTATTTGTTTTTCCACCACAAAGGTGAGTGGCTCAAACAGCAATAATACTACCACCGCCGCCGCCGTCACCGGAGCAGTAACCACCGCCACCGCAAACCTGAATCGTAAATGGAGTTCCAACACGCAATCCGATGTGACCACCACGGTGGTGAGCATCCAGAAGCAGCAGCAACCGTTGACCAACGGTGGTCAACGGCAGAAGGTGAAGGAAGAGAGCCATAGTCAGATTCATAGAACGAAAGAGAAAAATTCTTCGAGGCGCCAAAGTGGGCACGTGCCGTGTGGAAAGCGCACAAATTTTGGTTATGACAAAGACTTTGATCGAAGATTCTCGCTTGGGAAATTATTGGGACATGGACAATTTGGTTATACCTATGTTGGAATTGATAAAGCACGTGGAGATCGTGTTGCTGTTAAGAGACTCGAGAAGAACAAGATGGTTTTCCCGATAGCTGTTGAGGATGTTAAACGAGAGGTCAAGATATTGAAAGAACTTACAGGCCATGAAAATGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTGTACATAGTTATGGAGTTGTGCGAGGGCGGAGAACTGCTAGATCGTATATTGTCCAAGAAAGACAGCCGGTATACCGAAAAGGATGCAGCAGTTGTTGTTAGGCAGATGCTTAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTGCATAGGGACATGAAACCAGAGAATTTTCTTTTCAGATCATCCAAAGATGATTCATCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTTATTAAACCTGGAAAGAGGTTTACAGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTGAAACGGAAGTCGGGCCCTGAATCAGATGTATGGAGTATAGGTGTGATCACATACATATTGCTCTGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAAGAGGTGATAAGGAACAAGCCTGATTTCCGCCGAAAGCCATGGCCAACCATAAGTAATGCGGCTAAAGATTTTGTGAAAAAATTGTTGGTAAAGGATCCTCGTGCAAGATTAACTGCTGCTCAGGCTCTATCACATCCATGGGTTAAAGAAGGAGGGGAGGCATTGGAGATTCCTATTGATATATCTGTCCTGAACAACATGCGACAGTTTGTGAAGTATAGTCGATTGAAACAGTTTGCATTGAGGGCATTGGCTAGTACAATTAATGAAGAAGAGTTGTCTGATCTAAAAGATCAATTTGGTGCAATAGATGTGGACAAAAACGGTGTTATCAGCCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCGCGTGTACTAGAGATACTGCAAGCGATAGATAGCAACACAGATGGGCTAGTGGATTTCACTGAGTTTGTTGCAGCTGCATTGCATGTGCATCAATTAGAGGAACATGATTCCGAAAAGTGGCAGGAACGGTCACAGGCTGCTTTCGAGAAATTTGACTTAGATAAGGATGGCTATATTACTGTAGATGAACTTAGAGTGCATACATGCCTGAAAGGCTCTATTGAGCCATTGCTTGAGGAAGCTGATATCGACAAAGATGGAAAGATCAGCTTACCAGAATTTCGGAAACTTCTAAGAACTGCAAGCATAGGTTCTCGAAACATGATGAGCCCACACAGCCGTAGATGA 1713 0.4349 MGICFSTTKVSGSNSNNTTTAAAVTGAVTTATANLNRKWSSNTQSDVTTTVVSIQKQQQPLTNGGQRQKVKEESHSQIHRTKEKNSSRRQSGHVPCGKRTNFGYDKDFDRRFSLGKLLGHGQFGYTYVGIDKARGDRVAVKRLEKNKMVFPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFRSSKDDSSLKATDFGLSDFIKPGKRFTDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVIRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSHPWVKEGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTINEEELSDLKDQFGAIDVDKNGVISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAAALHVHQLEEHDSEKWQERSQAAFEKFDLDKDGYITVDELRVHTCLKGSIEPLLEEADIDKDGKISLPEFRKLLRTASIGSRNMMSPHSRR* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1076 570 MobiDBLite consensus disorder prediction 68 89 - -
Lan18g1076 570 CDD EFh 419 480 IPR002048 GO:0005509
Lan18g1076 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Lan18g1076 570 ProSiteProfiles EF-hand calcium-binding domain profile. 494 529 IPR002048 GO:0005509
Lan18g1076 570 Gene3D Phosphorylase Kinase; domain 1 105 197 - -
Lan18g1076 570 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Lan18g1076 570 ProSiteProfiles EF-hand calcium-binding domain profile. 452 487 IPR002048 GO:0005509
Lan18g1076 570 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 38 562 - -
Lan18g1076 570 ProSitePatterns EF-hand calcium-binding domain. 465 477 IPR018247 -
Lan18g1076 570 SUPERFAMILY EF-hand 404 555 IPR011992 -
Lan18g1076 570 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 562 - -
Lan18g1076 570 ProSiteProfiles Protein kinase domain profile. 112 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1076 570 ProSitePatterns EF-hand calcium-binding domain. 428 440 IPR018247 -
Lan18g1076 570 Gene3D - 393 552 - -
Lan18g1076 570 CDD EFh 500 554 IPR002048 GO:0005509
Lan18g1076 570 Gene3D Transferase(Phosphotransferase) domain 1 198 392 - -
Lan18g1076 570 MobiDBLite consensus disorder prediction 56 98 - -
Lan18g1076 570 SUPERFAMILY Protein kinase-like (PK-like) 99 401 IPR011009 -
Lan18g1076 570 Pfam Protein kinase domain 114 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1076 570 ProSitePatterns EF-hand calcium-binding domain. 537 549 IPR018247 -
Lan18g1076 570 ProSiteProfiles EF-hand calcium-binding domain profile. 415 450 IPR002048 GO:0005509
Lan18g1076 570 SMART serkin_6 112 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1076 570 CDD STKc_CAMK 111 371 - -
Lan18g1076 570 ProSiteProfiles EF-hand calcium-binding domain profile. 532 559 IPR002048 GO:0005509
Lan18g1076 570 ProSitePatterns EF-hand calcium-binding domain. 507 519 IPR018247 -
Lan18g1076 570 Gene3D - 413 482 - -
Lan18g1076 570 Pfam EF-hand domain pair 419 480 IPR002048 GO:0005509
Lan18g1076 570 Pfam EF-hand domain pair 500 553 IPR002048 GO:0005509
Lan18g1076 570 SMART efh_1 419 447 IPR002048 GO:0005509
Lan18g1076 570 SMART efh_1 528 556 IPR002048 GO:0005509
Lan18g1076 570 SMART efh_1 456 484 IPR002048 GO:0005509
Lan18g1076 570 SMART efh_1 498 526 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1076 Lan-Chr18 15900210 15905238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1076 1 566 EF-hand Containing Proteins AT2G17890 73.905 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan18g1076 Pkinase 7.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1076 K13412 - gmx:100817249 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1076 18 15900210 15905238 Lan6g0214 6 1612291 1617698 LSH