Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1069 ATGAAGCGGCAAAGGAAATCGAACATGGTTTCATGGGCTCCTCAACCTAATCTTTGTCAGGTTAAATTCTTTTTACGGGATGATTGCCCTGCAAAAGTTGGCCACTACTCTCAGAACACTCTTCAAGCAAAGACATTGACAATGTTTCCTTCAAGCACCAATGATTGTAATGATTTACCCCCTGGGTTCGAAGGCAATTATTTTCTGAGCAAATCAAAGGCTGATATTTCTCACATTCCTCAGGTTAAATGGGAGTGTGCTCCACAGTTTACCTTCACTTCTGGGTTGCCTATTGCAGCTGGTGAATTTAGTAGAGAAAAGGTTGATCAGAACCTTAGAGAAGCGAAAGTTTTTGAAGCACTTTACCCTCGTTCTTCTGCGATTCCTCCTAGCCCTTCTGTGTCCTTTGAAGTGGAGCAGGAAGACTATGATGATAATCTCACTCCTCTGATACCTATCACCGAACCTATTGAGGAAGAGGATTCGGCGGATGTTACACCCGAAATGGCAGTAACTAATTTGCTGCCACAAATCTTTCAGCAATATACCTCTGCAACATCTCCCATTATTCAACAATGCAACACCTCTTCTACTGTTCCCTCATCTGTATGTGGAGGGCCCTTGCCTAAGATATCTCCTGGTTTGGTGCAAGATTTAACTGCAGCGGCCGTAGCAACCATCTCAAAGAGTAACGATCAAGGAAGCTTGATTGATATGGATGTACTTGTTAAAATATTTAATGATCCAATATTGATTGAGAATTTGATTAAGGAACATACAACTGCAGCAGCTGCTACTGTTAGTGCCTCCTCAAATTGTGTGGGTATCCCCACTTCTAGATTGGATCCTGCTACATCAGTTCCAGTGTCAAAACCTGCTACACCTCCAAGTACAATGGTTTCATTACCTTCCATGTCAAACCAAGCAACTCCACCGGTTTCGTTCTTGACGCCTACACATGCTAAGCATGCTCATCCACCTGTTTCGGCGCTGACATCTGCACTTCATAACCCAGCAACTGCGTCATTTACACCGCATACTCCTCCTTCTCCTTCTCCAGCTGTGGATGCACCTGTTAATCATAGGCATGTCAGCAAAAATGTGCACCATGTGCCCGATGGAGTAAGGCGTGCAGCATCATTGCCTTCTGTTCCTTCCATTGAATTGAGCACAGTGCCGACCTTGCCTGCGAGTACTGTGCCATATCAATCAAGTATTGGTTCAGCCTATGCAGTAAAGAAGGATGCCAACTATTATAAGAACCTTATTAAGCAACATGGTGCAGATAAGAAAGTTACCTATGACTCAAAAATTGGTATCCATCATAATAACTTTGAAGATTTTAAATCGGTTAAAAACATTAAAACCGGGGTAATGATATCCAAAATCCAGAAGCCTTGCATATACTTTAAAAGCCAAAGGGGGTGTAGAAATGGTTCTCATTGCCCTTATCTGCATGATATATCAGATCAATGGAGAGTTAGTAATGTCATAGAGACCCCAAATGCAAAAGGTTTCAAACGTGGACCAGAAATTAAGTATGAAATGCCAGTTCAGTCGAGAGTTTGTAATGTCCAAGTGGCCCCAAATGCAAAAAGATTCAAACTAGGACCAGAAATTGACGGTTAG 1629 0.4242 MKRQRKSNMVSWAPQPNLCQVKFFLRDDCPAKVGHYSQNTLQAKTLTMFPSSTNDCNDLPPGFEGNYFLSKSKADISHIPQVKWECAPQFTFTSGLPIAAGEFSREKVDQNLREAKVFEALYPRSSAIPPSPSVSFEVEQEDYDDNLTPLIPITEPIEEEDSADVTPEMAVTNLLPQIFQQYTSATSPIIQQCNTSSTVPSSVCGGPLPKISPGLVQDLTAAAVATISKSNDQGSLIDMDVLVKIFNDPILIENLIKEHTTAAAATVSASSNCVGIPTSRLDPATSVPVSKPATPPSTMVSLPSMSNQATPPVSFLTPTHAKHAHPPVSALTSALHNPATASFTPHTPPSPSPAVDAPVNHRHVSKNVHHVPDGVRRAASLPSVPSIELSTVPTLPASTVPYQSSIGSAYAVKKDANYYKNLIKQHGADKKVTYDSKIGIHHNNFEDFKSVKNIKTGVMISKIQKPCIYFKSQRGCRNGSHCPYLHDISDQWRVSNVIETPNAKGFKRGPEIKYEMPVQSRVCNVQVAPNAKRFKLGPEIDG* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1069 542 MobiDBLite consensus disorder prediction 338 358 - -
Lan18g1069 542 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 507 - -
Lan18g1069 542 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 507 - -
Lan18g1069 542 ProSiteProfiles Zinc finger C3H1-type profile. 461 489 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1069 Lan-Chr18 15831847 15836530 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan18g1069 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1069 - - lang:109333118 1060.83