Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1062 ATGGATTCCCTTCTAAGAACTCAAACAATAGCCAACGTTGAATTAGAACCACTCCACATGGCTATGTTACTACTCATTGTCTCACTCATCTTCCTCTCATGTTGTGTCTCTCTAATTCGTGGAAGACCTCCATACCCACCAGGACCAAAAGGGTTACCCATCATAGGTAACATGCTTATGATGGACCAATTAACACACCGTGGTTTGGCCAACATAGCCAACAAATATGGTGGCATCTTTCACCTACGCATGGGGTTCCTTCACATGGTGGCTATTTCAGATGCAGAAGCAGCACGTCAAGTTCTTCAAGTTCAAGATAACATCTTCTCTAACAGACCAGCGACTATAGCCATAAGCTACCTTACCTATGACCGTGCTGACATGGCTTTCGCTCACTATGGACCCTTTTGGCGTCAGATGCGAAAGCTTTGTGTTATGAAGCTATTTAGCAGAAAGCGTGCTGAGTCATGGCAATCAGTGAGGGATGAAGTTGATACAGTTGTTAGAACCGTTGTAGCAAATACCGGCAAGCCTGTTAATATAGGTGAGCTAGTGTTCAACCTCACAAAAAATATAATCTATCGTGCGGCGTTTGGGTCAAGTTCACAAGAAGGACAAGATGAATTCATAGGGATACTTCAAGAATTCTCCAAATTATTTGGAGCTTTTAACATCGCAGATTTCATACCCTATATTGGAGGAATCGACCCTCAAGGCCTAAACACAAGGCTCGTGAAGGCACGTGCTGCTTTGGATAGCTTCATAGACAAGATTGTAGATGAACATATATTGAAGAAGAGGAATAAGATTGATGTTGTTGTTGATGAAGAAACAGATATGGTTGATGAATTGTTGGCTTTTTACAGTGAAGAAGTTGAAGCAAATGAATCAGATGATCTTCACAACAGTATCAAGCTCACTAAGGATAATATCAAAGCTATCATCATGGATGTCATGTTCGGAGGAACAGAGACGGTGGCATCAGCAATCGAATGGGCCATGGCAGAGTTGATAAGAAGCCCAGAAGATTTGAAGAAAGCCCAACAAGAACTCACTGATGTGGTGGGCTTAGCCCGACGGGTAGAAGAGCCTGACTTCGAGAAACTCACTTACTTCAAATGTATTATCAAAGAAACCTTACGTCTCCACCCACCCATCCCTCTCCTCCTCCATGAAACGGCGGAGGACGCCACCGTCAACGGCTACTTCGTCCCCAAAAAATCACGCGTCATGATTAACGCGTGGGCTATTGGGAGAGACAAAAACTATTGGGAGGAACCCGAAGCTTTTAAACCGACCCGGTTCTTGAAACAGGGTGTGGCAGATTTTAAAGGGAGCAACTTTGAGTTTATTCCATTCGGGTCGGGTCGTAGGTCATGCCCGGGAATGCAGTTGGGGCTGTACGCGCTTGAGTTGGCGGTGGCTCACTTACTTCATTGCTTCACATGGGAGTTACCAAATGGAATGAAACCGAGTGAGATGGATATGAGTGACGTGTTTGGACTCACCGCTCCACTCGCGAGTCGACTCGTTGCTGTGCCAACTAAGCGCGTCGTGTGCTCTCTTGATTAG 1572 0.4517 MDSLLRTQTIANVELEPLHMAMLLLIVSLIFLSCCVSLIRGRPPYPPGPKGLPIIGNMLMMDQLTHRGLANIANKYGGIFHLRMGFLHMVAISDAEAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDTVVRTVVANTGKPVNIGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYIGGIDPQGLNTRLVKARAALDSFIDKIVDEHILKKRNKIDVVVDEETDMVDELLAFYSEEVEANESDDLHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELIRSPEDLKKAQQELTDVVGLARRVEEPDFEKLTYFKCIIKETLRLHPPIPLLLHETAEDATVNGYFVPKKSRVMINAWAIGRDKNYWEEPEAFKPTRFLKQGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPNGMKPSEMDMSDVFGLTAPLASRLVAVPTKRVVCSLD* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1062 523 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Lan18g1062 523 SUPERFAMILY Cytochrome P450 46 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 Pfam Cytochrome P450 46 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lan18g1062 523 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 18 523 - -
Lan18g1062 523 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 Gene3D Cytochrome P450 40 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan18g1062 523 PANTHER CYTOCHROME P450 84A1-RELATED 18 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1062 Lan-Chr18 15757978 15761687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1062 53 522 Monolignol Biosynthesis Gene Families AT4G36220 76.533 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1062 K09755 - gmx:100783430 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0210 17 1428664 1431154 Lan18g1062 18 15757978 15761687 LSH