Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1057 ATGGCGGGTATATTTTCATTAGGTGGTGGTGGTGGTGGTAGTGGTGGTGGAGGGAGAGAAAACAACAACAACAACCAACAACAGCAACCCACAGATTTTCTTCCTCCTCCTCCAGAAGCCTTATTTTGGTATAATAATAACAAGAATGTGGAAGATGTACGAGGTTTTGAGTTATGGCACCACCAACAACAACAGCAACAAAGACCTATTATACACCAAGATCTTTACTCCTTAGGGGTGGGTCCCAGTAGGTCCTCCGATGCGGTGGCGAGCTCAGGCAGCGGCGGCGGAGGGATTAGTTGTCATGATTGTGGGAACCAAGCTAAGAAAGATTGCCCTCATATGAGGTGCAGAACTTGCTGCAAAAGTCGTGGTTATCATTGCCAAACCCATGTTAGAAGCACATGGGTTCCTGCATCAAAGCGTCGCCAAAGACTTCAACAACAAGAACAAGAACCAAACACTGAGAGAGATCATCATAACCCCACCTCTTCTATTCCTTTGCGTTCTAACCCTTCAATTTCTCCAACAGGGTTAGAGCATGCAAATTTTCCTGCTATGGTGAGTTCTTCTGCTGAGTTCAGATGTGTCCGAGTTAGTTCCATGGATGTCACTGAGGGACAATACGCTTATCAAACAGCTGTGAACATTGGAGGACATGTTTTCAAAGGAATTCTCTATGACCAAGGTCCAGATCATAGCACTAGTAGTCACACCGGTGGAGGAGAAAACTCCTCCACCGGTGTACTCCGCGATGGAGAAGTCCAATTCTCGAACCTCATTGCCGCCACCACCACCATCACCACCACCGCAGGAGCACTGGTGGATCCGTCTTTCTTGTATCCAACTCAAGTTAACACATTCATGCCTCCTAGTGGCAGGCAATTCTTCCCTCACCCAAGATCTTGA 909 0.4719 MAGIFSLGGGGGGSGGGGRENNNNNQQQQPTDFLPPPPEALFWYNNNKNVEDVRGFELWHHQQQQQQRPIIHQDLYSLGVGPSRSSDAVASSGSGGGGISCHDCGNQAKKDCPHMRCRTCCKSRGYHCQTHVRSTWVPASKRRQRLQQQEQEPNTERDHHNPTSSIPLRSNPSISPTGLEHANFPAMVSSSAEFRCVRVSSMDVTEGQYAYQTAVNIGGHVFKGILYDQGPDHSTSSHTGGGENSSTGVLRDGEVQFSNLIAATTTITTTAGALVDPSFLYPTQVNTFMPPSGRQFFPHPRS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1057 302 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 184 231 IPR006511 -
Lan18g1057 302 MobiDBLite consensus disorder prediction 1 36 - -
Lan18g1057 302 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 100 142 IPR006510 -
Lan18g1057 302 PANTHER PROTEIN SHORT INTERNODES 1 300 - -
Lan18g1057 302 MobiDBLite consensus disorder prediction 139 178 - -
Lan18g1057 302 Pfam Domain of unknown function (DUF702) 98 232 - -
Lan18g1057 302 MobiDBLite consensus disorder prediction 145 163 - -
Lan18g1057 302 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 300 IPR007818 GO:0003700|GO:0006355
Lan18g1057 302 MobiDBLite consensus disorder prediction 164 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1057 Lan-Chr18 15713907 15716208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1057 1 302 C2H2 Transcription Factor Family AT3G51060 41.910 8.95e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lan18g1057 DUF702 1.4e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1057 - - lang:109331278 381.719