Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1053 ATGAATGACCTAATGACAAGTTCGTTCCTAAGTTATGTTGAACTGAAGAAACAAGTACAGAAGGACATTGAAAAAGACTATCTTGACATTGAAGCAGGGCAACTCAACCCAGCACAAGACCCTAACCTCTCTAAATTCTTCATAGAAGTTGATGGAGTCAAGGTTGACATGGAAGAGATCACCAATCTCTTATTTGATCTCAAGCAATTGAATGAAGAGACAAAGTCTACCCATAGTTCCAAAATCCTACGAGGCCTAAGGGATCGCATGGATTCGGATATGGTTGCCGTGTTGCGCAAGGCGAAGATCATCAAGGCTAAGCTTGAGGCTCTTGACAAATCCAACATTGCCAATCAAAGCACATCAGAGTCCTACAAAGAGGGTACCCCTATTTATAGGACTAGGATGTCTGTCACAAATGGTTTGAGGGTCAAACTTAGGGACATGATGAATGATTTCCATTCCTTGAGGGACAAGATTCTTTCTGAGCATAAGGAAGATTTGAAGAGAAGGTACTATACAGCAACCGGCGAGGTTCCGAGTGAGGAGGCCATGGATAAGATGATCTCAGGGAGCCTCAAAGTTGAGTTTTTGGCTGGGAAAACTGAGGCTGATATGGGTAGTCAAATTAGGCATGAGGCTGTGATGGATATCCAAAGGAGTTTGAATAAGCTTCACCAAGTGTTTCTTGATATGGCTATTCTTGTTGAGACCCAAGGAGAGAAGGTGGATAACATTGAGGATAATGTGGCCAATGCAGGTAACTTCATCCATGGTGGAACCAATAGTCTTCACTATGCGAATCAGATGAAGAAGAGGAGCAAAAAATGGGTCTTTTGGGTTTGTGCTGTGGTGCTGATTATACTTTTAGTTTGCATCATTGCAATGTTGTCTTCTTGA 900 0.4233 MNDLMTSSFLSYVELKKQVQKDIEKDYLDIEAGQLNPAQDPNLSKFFIEVDGVKVDMEEITNLLFDLKQLNEETKSTHSSKILRGLRDRMDSDMVAVLRKAKIIKAKLEALDKSNIANQSTSESYKEGTPIYRTRMSVTNGLRVKLRDMMNDFHSLRDKILSEHKEDLKRRYYTATGEVPSEEAMDKMISGSLKVEFLAGKTEADMGSQIRHEAVMDIQRSLNKLHQVFLDMAILVETQGEKVDNIEDNVANAGNFIHGGTNSLHYANQMKKRSKKWVFWVCAVVLIILLVCIIAMLSS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1053 299 CDD SynN 43 193 IPR006011 GO:0016020
Lan18g1053 299 Gene3D - 201 298 - -
Lan18g1053 299 PANTHER SYNTAXIN-112 3 295 - -
Lan18g1053 299 CDD SNARE_syntaxin1-like 211 264 - -
Lan18g1053 299 Gene3D - 38 169 - -
Lan18g1053 299 Pfam SNARE domain 241 291 IPR000727 -
Lan18g1053 299 PANTHER SYNTAXIN 3 295 IPR045242 -
Lan18g1053 299 Pfam Syntaxin 45 240 IPR006011 GO:0016020
Lan18g1053 299 SUPERFAMILY t-snare proteins 40 260 IPR010989 GO:0016020|GO:0016192
Lan18g1053 299 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 205 267 IPR000727 -
Lan18g1053 299 SMART SynN_4 38 165 IPR006011 GO:0016020
Lan18g1053 299 SMART tSNARE_6 200 267 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1053 Lan-Chr18 15678757 15680437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1053 1 299 SNARE and Associated Proteins AT2G18260 58.766 1.70e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1053 K08486 - gmx:112997615 470.314