Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1043 ATGTCTTCTCATAACTCATCACCTGATGATGCTACACCTGATAATGCTACACCCGATAACGCTACACCTGATGATGCTGACAACTCATCATCGTCTTCACCATCACCACCATCTGAACCATCTTCGTCTACATCACCACCATCACCATCAGAATCATCATCACCGCCTAAATCACCACCGTCACCATCAAACCCACCACCATCATCACCCCCACCGTCAGAGCCACCACCATCATCGCCACCACCATCAGAACCGCCGCCATCCTCACCACCACCTTCAGAACCACCGCCATCCTCACCACCACCAAAAGAACCACCAGCATCATCACCACCACCAAAAGAACAATCACCACCACCAAAAGAACAATCGCCACCACCAAAAGAACAATCGCCACCACCAGATCAAAATTCCTCACCCCCTCCAACACCACCCTCATCTGATAAATCTCCACCGCCACCTTCACCATCAAACATTCCAACCCCACCATCATCCAATCCAACACCACCATCATCCAATAACGGGTCTCCACCTCCTCCAGCGTCAATAGGCCATTCTCCACCCTCACCTTCTAATGGATCACCGTCACCACCACAAAACAAATCATTGCCAAGTAATAATAATAGCACACCATCCCCTCCAAACCCTAATGGTGGTGGCAACAATACCAGCAAGGCAATTGTTGGAGCAGTAATTGCTGCAGCGTTAATTATTCTGATTATGGTCATAGTTTGTGTTATTTACTGCAGGAGGAAGAAGAAAAGAAAGCAAATGTACTATTACGGAGAACGAGATGAAAAAGGGAATCACTATTACAATAATAGTGGTCAGCACCAAGGTGGTTATTATGGTGGTCCACCCCATCCTGACCATGTTGTTGGGGTCCAAAGTGGAATGGCTCCTCCAAATAGTGGTTGGGGTGCAACACCTCCACCAATGGTGAACAGTGCTGAAATGAGCTCCAATTTCTCAGCGGGACAACAACCTCTTCCTCCTCCCTCACCTAACCTTGCCCTAGGCCTTAAGGGTACCTTCTCTTATGAAGAACTAGCAGCTGCTACCAACGGCTTTAATAATCAGAATTTGATAGGACAAGGTGGCTTCGGTTATGTTCACAAAGGGGTGTTGCCTAATGGAAAAGAAGTTGCAGTTAAGAGCTTGAAAGCAGGTAGTGGACAAGGAGAGCGAGAGTTTCAAGCTGAGATTGATATCATTAGCCGTGTTCATCATCGCCATCTTGTTTCACTTGTTGGATATTGTATTTCCGGTGGACAAAGAATGTTGGTCTATGAATTCATTCCCAATAATACTTTAGAATATCATCTTCATGGAAAGGGTGTGCCTACCATGGATTGGCCTGCTAGAATGAGGATTGCAATAGGTTCAGCGAAAGGGCTTGCATATCTTCATGAAGACTGTCATCCTCGCATTATCCATCGTGATATCAAAGCTGCAAATGTTCTCATTGATGACAGTTTCGAAGCAAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTTCTGATACCAATACTCACGTATCCACCCGTGTCATGGGAACTTTCGGATACCTTGCCCCCGAATATGCATCAAGCGGAAAATTGAGTGAGAAATCTGATGTTTTCTCATTTGGTGTGATGCTATTGGAACTCATATCTGGGAAACGACCAGTGGATCTCACAAACACCATGGAAGACAGCTTAGTGGACTGGGCTCGACAACTATTGACTCATGGACTGGAGGAAGATCCTGGAAACTTTGGGGAATTGGTTGATCCATTTTTGGAAGGAAATTACAATCCTCATGAAATGGCAAGGATGGCTGCTTGTGCTGCTGGCAGCATTCGCCACTCTGCTAGGAAGCGTCTCAAAATGAGCCAGATTGTGAGAACATTGGAAGGAGATGTCTCACTAGATGATTTGAAGGAAGGGATGATAAAAACAGGAACTACCAATGTTACCTCTTCATCTGGCGAAATTCCTTATGATACAATGCAATACAATCATGATATTCAACAGTTCAGAAAAGCAGTGTTTTCAAGTGAAGTTGGCACCAGCAGTGGCTCAAGCAGCGAAATGAGTCGTATTCAAGAGACCCCAAGGAAGCTGAATTAA 2109 0.4547 MSSHNSSPDDATPDNATPDNATPDDADNSSSSSPSPPSEPSSSTSPPSPSESSSPPKSPPSPSNPPPSSPPPSEPPPSSPPPSEPPPSSPPPSEPPPSSPPPKEPPASSPPPKEQSPPPKEQSPPPKEQSPPPDQNSSPPPTPPSSDKSPPPPSPSNIPTPPSSNPTPPSSNNGSPPPPASIGHSPPSPSNGSPSPPQNKSLPSNNNSTPSPPNPNGGGNNTSKAIVGAVIAAALIILIMVIVCVIYCRRKKKRKQMYYYGERDEKGNHYYNNSGQHQGGYYGGPPHPDHVVGVQSGMAPPNSGWGATPPPMVNSAEMSSNFSAGQQPLPPPSPNLALGLKGTFSYEELAAATNGFNNQNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFIPNNTLEYHLHGKGVPTMDWPARMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTSDTNTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELISGKRPVDLTNTMEDSLVDWARQLLTHGLEEDPGNFGELVDPFLEGNYNPHEMARMAACAAGSIRHSARKRLKMSQIVRTLEGDVSLDDLKEGMIKTGTTNVTSSSGEIPYDTMQYNHDIQQFRKAVFSSEVGTSSGSSSEMSRIQETPRKLN* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1043 702 MobiDBLite consensus disorder prediction 197 220 - -
Lan18g1043 702 MobiDBLite consensus disorder prediction 1 220 - -
Lan18g1043 702 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Lan18g1043 702 MobiDBLite consensus disorder prediction 680 696 - -
Lan18g1043 702 MobiDBLite consensus disorder prediction 269 333 - -
Lan18g1043 702 MobiDBLite consensus disorder prediction 39 196 - -
Lan18g1043 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Lan18g1043 702 PRINTS Proline rich extensin signature 16 37 - -
Lan18g1043 702 PRINTS Proline rich extensin signature 40 56 - -
Lan18g1043 702 PRINTS Proline rich extensin signature 58 75 - -
Lan18g1043 702 PRINTS Proline rich extensin signature 76 101 - -
Lan18g1043 702 Gene3D Phosphorylase Kinase; domain 1 335 431 - -
Lan18g1043 702 ProSiteProfiles Protein kinase domain profile. 356 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1043 702 SUPERFAMILY Protein kinase-like (PK-like) 331 630 IPR011009 -
Lan18g1043 702 Gene3D Transferase(Phosphotransferase) domain 1 432 644 - -
Lan18g1043 702 MobiDBLite consensus disorder prediction 1 38 - -
Lan18g1043 702 PANTHER RECEPTOR-LIKE KINASE 129 692 - -
Lan18g1043 702 Pfam Protein tyrosine and serine/threonine kinase 359 559 IPR001245 GO:0004672|GO:0006468
Lan18g1043 702 SMART serkin_6 356 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1043 702 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 129 692 - -
Lan18g1043 702 MobiDBLite consensus disorder prediction 680 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1043 Lan-Chr18 15606897 15612064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1043 186 702 Trihelix Transcription Factor Family AT1G70460 48.473 9.13e-154 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan18g1043 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1043 - - lang:109332805 960.674