Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1023 ATGTTTCTTCATCAACAAACCAACCTTGCTATTGTTCTTACAATCTTGATGGTATACACAATAAGAGCTCAAAAGTGCGATCACCATTGTGGTGAACAAACCCTTCAATATCCTATTGGCTTCTCTGAAGGTTGTGGAGTACAACTAAACTGCACCAACAACCGAATCCACCTTGGTGAATTTGATATCCAAAATGTAACAGCTAATAGCATATTCATCAATCTTCCTTCAAAATGCAACCGTAGCATGCAATCAATTGCTCCACTTTTCAGTAACAACTTTGCTCCCACATGGAACAATAGTTTTCTGGTTCAAGATTGTTCAACTCCTCTTGGTGACTGCGTTATTCCAACCTCAATTTTCTTGGGAAACCAGGTTGAGGTGGAAAACTGTGACAACAAAAGTGGTAACATAAGTTGTTTTACGAGGTCACAGAAACAACATGAAGAATTGGATGTTGTGGCATATGAGGATTTGGACCAAAGTTCGTGTAAGTTTTTGTTCTCAGCAATTGCAATTGGGCAGAAAATCGAGTTTCAGATTGTTGAGTTAGGGTGGTGGCTTCAAGGTTCGTGTGGTCAATGTTCTTTCAACACTACCTGCACAACGGTTAATCTTCAAGGAGGGGGGTTCGGGTTCAGGTGCCAGTGTTTTGAAGGTTTCGTCGGAGATGGTTTCATCAACGGCACTGGTTGCAGCAAAGTTATCTCGTCATCGAGTTGCAGTGCTTCAACACTAACGTCTGGGGTGTGTGGGAAATCAACCAAAATTGGTGTTCTTGTTGGAGTGATCATAGCTGGAGCTGTGGTGGTGGTTGTCCTTGCTCTAGTATGCTACTGTGCTAGGCGACGTTCAACTTGGTTGCGAAAACATACAAGAGCAAAGCACCTAATACATGAAGCTGCAGGAAACTCTAGTGTACCTTTATACCCTTACAAAGAAATAGAAAGAGCCACAAACTCTTTCTCTGAGAAGCAGATGCTAGGAACTGGTGCTTTTGGTACAGTTTATGCTGGAAAGCTTCACAACGATGAGTGGGTTGCTATAAAAAAGATCAGGCATAGAGATACTAACAGTGTTGGGCAAGTCATGAATGAGATAAAACTAATTTCTTCAGTGAGTCACCCGAATTTAGTACGCCTCCTAGGTTGCTGCATAGAGGGAGGAGAGCAGATTCTTGTCTATGAGTATATGCCTAATGGAACATTATCTGAGCATTTGCAAAGAGAGAGGAGTAAAGGTCTTCCATGGACAATAAGACTTACAATTGCTACTGAAACTGCTAATGCTATAGCTTATCTACATTCTGCAATTCATCCTCCAATTTACCACAGAGACATAAAATCCACAAACATACTGTTGGATTATAGCTACAAATCTAAAGTAGCTGATTTTGGACTTTCTAGGCTAGGCATGACAGAAACATCACATATCTCAACTGCACCACAAGGTACTCCAGGCTATGTTGATCCCCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTGTACAGTTTCGGAGTGGTGTTGGTCGAGATAATAACTGCCAAGAAAGTGGTCGATTTTGCTAGACCTCAGAGTGAGGTTAATTTGGCTGCACTTGCTGCTGATAGGATTAGGAGTGGTTCTATCGATGAGATCATAGATCCCTTCCTTGAACCAAATAGAGATGCTTGGACACTGTATTCTATTCATAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCACAGTGACATGAGGCCTACTATGACGGAAGTGGCAGAGGAGCTAGAACACATCAGACGCAGTGGATGGGCAACTATGGAGGAAAATATATGCACAGCTTCGTCATTCGGATCTGTGAGTTCATCACCACTGCGCAATGGAAGTGAGAGATCTCTGAGTGGTATTAATCTTAAGAGAGCAGGGAAAGGGAGCGAGAGATTGATTGTCCCACAAAAGGCAGAGAGTATTTTGCAAATTGTGGAGGAGAAGGACAACTCTCCCATATCAGTGCACGATCCTTGGTCAAGTGGACATAGTTCACCTTCAACAAACAGCTTGCTGGAAAATGTAGTTCAGTGA 2076 0.4229 MFLHQQTNLAIVLTILMVYTIRAQKCDHHCGEQTLQYPIGFSEGCGVQLNCTNNRIHLGEFDIQNVTANSIFINLPSKCNRSMQSIAPLFSNNFAPTWNNSFLVQDCSTPLGDCVIPTSIFLGNQVEVENCDNKSGNISCFTRSQKQHEELDVVAYEDLDQSSCKFLFSAIAIGQKIEFQIVELGWWLQGSCGQCSFNTTCTTVNLQGGGFGFRCQCFEGFVGDGFINGTGCSKVISSSSCSASTLTSGVCGKSTKIGVLVGVIIAGAVVVVVLALVCYCARRRSTWLRKHTRAKHLIHEAAGNSSVPLYPYKEIERATNSFSEKQMLGTGAFGTVYAGKLHNDEWVAIKKIRHRDTNSVGQVMNEIKLISSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSEHLQRERSKGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSTNILLDYSYKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAKKVVDFARPQSEVNLAALAADRIRSGSIDEIIDPFLEPNRDAWTLYSIHKVAELAFRCLAFHSDMRPTMTEVAEELEHIRRSGWATMEENICTASSFGSVSSSPLRNGSERSLSGINLKRAGKGSERLIVPQKAESILQIVEEKDNSPISVHDPWSSGHSSPSTNSLLENVVQ* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1023 691 MobiDBLite consensus disorder prediction 668 691 - -
Lan18g1023 691 Pfam Protein tyrosine and serine/threonine kinase 325 594 IPR001245 GO:0004672|GO:0006468
Lan18g1023 691 ProSiteProfiles Protein kinase domain profile. 322 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1023 691 SUPERFAMILY Protein kinase-like (PK-like) 301 595 IPR011009 -
Lan18g1023 691 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 672 - -
Lan18g1023 691 Gene3D Phosphorylase Kinase; domain 1 282 397 - -
Lan18g1023 691 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Lan18g1023 691 MobiDBLite consensus disorder prediction 666 691 - -
Lan18g1023 691 Gene3D Transferase(Phosphotransferase) domain 1 398 614 - -
Lan18g1023 691 SMART serkin_6 322 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1023 691 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 672 IPR045274 GO:0007166
Lan18g1023 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1023 Lan-Chr18 15264252 15268741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1023 26 689 Receptor kinase-like Gene Family AT2G23450 58.641 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan18g1023 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1023 - - gmx:100779130 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0285 17 1992429 1997276 Lan18g1023 18 15264252 15268741 LSH
Lan18g1023 18 15264252 15268741 Lan6g1393 6 16968705 16974376 LSH
Lan18g1023 18 15264252 15268741 Lan6g1393 6 16968705 16974376 PCT
Lan6g1393 6 16968705 16974376 Lan18g1023 18 15264252 15268741 PCT