Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1018 ATGGACACGCTCATCGTCCACGACAGTGACAGATACGATTTCGTTCGTGATATCGGTTCCGGCAATTTCGGCATCGCAAGGCTTATGAGAGATAAACACACCAAAGAACTCGTTGCTGTCAAGTATATCCAACGCGGTGATAAGATTGATGAAAATGTAAAGAGAGAAATTATTAATCACAGCTCTCTTAGACATCCTAACATTGTTAGGTTTAAAGAGGTCATTTTGACACCTACTCATTTGGCCATTGTCATGGAATATGCATCTGGAGGAGAACTATTTGAGCGAATCTCCAATGCAGGGCGTTTTACTGAGGACGAGGCTCGTTACTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGCCATGCAATGCAAGTATGTCACCGTGACTTAAAGTTGGAAAACACTTTGTTGGATGGAAGCTCAGAACCTCGTTTAAAGATATGTGATTTTGGATACTCTAAGTCTTCAGTGCTTCATTCACAGCCAAAATCAACTGTGGGAACTCCAGCATATATAGCTCCTGAAGTATTGCTCAAGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTGTATGTGATGCTAGTTGGAACATATCCTTTTGAAGATCCTAGAGAACCCAAGGATTACCGAAAGACAATTCAGAGGGTTCTCAGTGTCCAGTATTCCATCCCAGATTTTGTTCATATATCTTCCGAGTGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCTGCAGAGAGAATCACCATTCCTGAAATATTGAAAAATGAATGGTTTATGAAGAATCGTTCTGCTGAAATGATGGATGAGAAGATGACGAGTAACGAGTTTGAAGAGCCAGATCAGCCCATGCAGAGCATTGATACAATCATGCAGATAATTTCAGAAGCTACCATACCTGCAGCTGGGACCTATTCTTTAGACCAGTTTATGGCTGATAACATGTATATGGATGATGACATGGATGATTTAGACTCTGATTTTGAGCTTGACGTAGATAGCAGCGGGGAGATAGTGTATGCTGACGTGCCATATAGTTGA 1068 0.4157 MDTLIVHDSDRYDFVRDIGSGNFGIARLMRDKHTKELVAVKYIQRGDKIDENVKREIINHSSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERISNAGRFTEDEARYFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSSEPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGTYPFEDPREPKDYRKTIQRVLSVQYSIPDFVHISSECRHLISRIFVFDPAERITIPEILKNEWFMKNRSAEMMDEKMTSNEFEEPDQPMQSIDTIMQIISEATIPAAGTYSLDQFMADNMYMDDDMDDLDSDFELDVDSSGEIVYADVPYS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1018 355 Pfam Protein kinase domain 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1018 355 ProSiteProfiles Protein kinase domain profile. 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1018 355 PANTHER SERINE/THREONINE KINASE 7 345 - -
Lan18g1018 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Lan18g1018 355 SMART serkin_6 12 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan18g1018 355 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 7 345 - -
Lan18g1018 355 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lan18g1018 355 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Lan18g1018 355 SUPERFAMILY Protein kinase-like (PK-like) 7 304 IPR011009 -
Lan18g1018 355 Gene3D Transferase(Phosphotransferase) domain 1 88 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1018 Lan-Chr18 15229976 15234835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1018 4 271 CBL-interacting serine-threonine protein kinases AT4G24400 42.754 1.38e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lan18g1018 Pkinase 4.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1018 K14498 - gmx:100801175 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1018 18 15229976 15234835 Lan18g0497 18 9521457 9525160 PCT